Porcisia hertigi: 94288890
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Entry
94288890 CDS
T10408
Symbol
JKF63_02789
Name
(RefSeq) hypothetical protein
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
phet Porcisia hertigi
Pathway
phet03420
Nucleotide excision repair
phet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
94288890 (JKF63_02789)
03460 Fanconi anemia pathway
94288890 (JKF63_02789)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phet03032
]
94288890 (JKF63_02789)
03400 DNA repair and recombination proteins [BR:
phet03400
]
94288890 (JKF63_02789)
DNA replication proteins [BR:
phet03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
94288890 (JKF63_02789)
DNA repair and recombination proteins [BR:
phet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
94288890 (JKF63_02789)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
94288890
NCBI-ProteinID:
XP_067755257
UniProt:
A0A836LFT0
LinkDB
All DBs
Position
30:<103161..>106973
Genome browser
AA seq
1270 aa
AA seq
DB search
MPSEEDLTLTLEGGARTCSEFIGAVSAREAPDNPSVQMCILSLGFNVESVVAQLLYQRIV
VNRAHRRVYCVVFPDRRMPGVLTRFANFIGRHLSLRHAKETGRGQTDASADAASGHASPI
PVVAIEEGTGTKERCAVFQRGAVAVLSSHALCADLLHRRLAVELVGMTVLVLPNSLLSGV
RLQDALAPQTAFCVQLLLRSGRGVSGGQGPPPITLVSDAPMLMRYLVQRHHLGAERFVQQ
LQVGDIQLFPRFRLDFVRHFEELSRTLRRSLAVDRVVAPVAASVLALDGLLTKIVLETLQ
ELQHLEKQLHAQRSVSNGDTTAGISTAGGSHTQAWPSAVRPADAATEADEDASALRFLPR
ARLSANSVQGHPNYSTFPRSGTPNGSSTTSYIRHGWRATAEHERKGVFFGGISKEDAISV
DFSELDSDLRAVVRRHESHWPYRLLTESLIDVRRLRRATRGTAYTFLLELESVLERRLPQ
RSVYGTGTPPPAALWTLSSHFHDVVTVATHRVGTVVHMPSAAPVPGVAPAKSAATSPTSS
AKDVVVLVDSTSDNDECTEAHHDTAAISSTAAPPGQSPTSSGGTMVPRLIPNTDEHEGDV
EVVVRLVFSWCRTMLRRLARRGKALTDASEPRPALLLLTLSPNAVVRYTERLTNSLEMYK
RLQLQRFMRVYQAKYGVELTELVEAQGASDVAAQLPSALPWRTEDADDVPSEEEGDLVAG
EDKEIDSRSGPHRVLDTTAYAMRRFSRQDGRDTGVAERDASALYADGGRHTQALMEDIGV
GAFHQALLSKLPPPPPRTRSIDEPHTSCDSESRSSAPASIAKSLLMLERVREGVVTLCPD
CGGATGDYDATATATFGRMPRVLVLDASAMSATELTMLLDGSHAALQLGFPVTAAPQVPA
VSTCGAEGAEGASAWLRVDRVVLARQHLVLLRQLEMAQDELPAERLASIKVQLITTSLAE
LDFKKTVQTEQRAFESLAHTKATLTGTLLAAQVSLRQTEEALESGWQVSRRRAGPRKGTI
MGRVVGDSLCRPASPPPALPCIVFDEREFRSSLPYDLYRRGVQIVPLTLTTADYVLSPEY
AVERKSLQDYFQSVMSGRIRHQLAALSRRYARPLCLIEFQRGLPFRLTHTAIYAKTAVLM
ASYPRVSFIWARSSAHAAAMLVLLKKSVAVANVDPADPSLTATAMNPGTAADVGGVTATA
AEREAAHYAARVLSKFPGITHQNAPRVMQLCGSLIGLATISHAALVAVMGEEDAGRLYSF
LHTPFHERVD
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggaggaggatctcactctcacactagaggggggggctagaacatgctcagag
ttcattggggccgtatctgcccgcgaggcaccagataatcccagtgtacagatgtgcatt
ctcagtctcggcttcaatgtggagagtgtcgttgctcaattgctgtaccagcgcatagtc
gtgaacagggcccatcggcgcgtctattgtgtggtttttccggatcgccgtatgcccggt
gtgttgacgcgttttgccaactttatcgggcggcatctgtcgctgagacacgcaaaagag
acagggcggggtcagactgatgcctctgcggatgcggcatccggtcacgcgtctcctatc
cctgtagtcgcaattgaagagggaacgggtacaaaggagcggtgcgcagtgttccagcgc
ggggcggtggcggtgctcagcagtcacgctctgtgcgccgatctactccatcggcggctc
gcggtggagctcgttggaatgacagtactcgtgctgcccaattctttgctcagcggggtt
cgactccaagatgcgctggcaccgcagacggccttctgcgttcagctgctgctgcgtagt
ggcagaggtgtgagcggcgggcagggccccccaccgatcactctcgtctctgacgcgccg
atgctcatgcggtaccttgttcagcgacatcacttaggagcggagcggtttgtccagcag
ctgcaggttggcgatattcagttgttcccacggtttcgtctggactttgtgcggcacttt
gaggagctcagtcgcaccttgcggcgttcactcgcagtggaccgcgtcgtggcccctgtg
gcggcgagcgtattggccttggacggcctccttacgaagattgtgttggagacgctgcag
gagctccagcacctggagaagcagctccacgcgcaaaggagcgtcagcaatggtgatacc
actgcgggaatctcgacagcaggaggctcacacacacaagcgtggccttccgccgtccgg
cctgctgacgctgcgacagaggctgatgaggatgccagcgctctccgtttcttgccacgc
gccaggctctcagcgaattctgtgcagggccaccccaactacagtaccttcccgcgcagt
ggcacgcccaacggcagcagcactacgtcgtacattcgccatggctggcgtgcaacagcg
gagcacgaaaggaagggggtattctttggcggtataagcaaggaggacgccatctctgtt
gacttctccgagctcgacagcgatctgcgcgcggtcgtgcgtcgtcatgagtcacactgg
ccgtatcgcctcctcaccgagagtctgatcgatgttcggcgcttgcgccgtgcaacccgc
ggcacagcgtacacgtttcttcttgaattggagtcagtgctggaacgccgactgccgcaa
cgtagcgtctatggtaccggcacgcctccacccgccgcgttgtggacactctcctctcac
ttccacgacgttgtcacagtggcaacacaccgtgtggggactgtggtgcacatgcctagc
gccgctcccgtccctggcgtcgcgcccgccaagagtgccgctacaagtccaacgagctcc
gcgaaggatgtggtcgtgctggtggacagcaccagtgacaacgatgagtgtactgaggca
caccacgatactgctgcgatttcttctactgccgcgcctcccggccagtcacccacctca
tcgggtggaacaatggtccctcggctcatacccaatacggatgagcacgaaggtgacgtg
gaggtagttgtgcgactggtgttcagttggtgccgcacgatgttgcggcgtctcgcacgt
cgaggcaaagctctaacggatgcctcagagcctcgccccgccctgcttcttctcactctc
agccccaacgctgtggtgcgctacacagagcgcctcacgaactcgctggagatgtacaag
cggttgcagcttcagcgcttcatgcgggtataccaggcgaagtacggtgtggagttgact
gagttggtggaggcgcagggggcaagtgacgtggcggcgcagctgccctcagcactcccc
tggcgtacagaagatgctgatgacgtccccagcgaagaggagggagacttggtagcgggc
gaggacaaggagattgacagtcgcagtggaccgcatcgcgtcttggacaccactgcttac
gcgatgcgccgtttttcgaggcaagatggccgtgataccggcgttgcagagcgcgacgcg
tctgcattgtacgccgacgggggcagacacacgcaggcactgatggaggacatcggcgtt
ggcgccttccatcaagcccttctatccaagctgccgccgccgccgccacgaacgcgtagc
attgacgagccgcacacatcatgtgatagcgaatctcgatcctcagcaccggcatccatt
gccaaatcgctgcttatgcttgagagggtcagggagggagttgtgacgctctgccccgac
tgcggtggcgctacgggggactacgatgccactgccaccgctaccttcggacggatgcca
cgcgtgttggtgctggacgcatccgcgatgtctgcaacagagctgaccatgttgctggat
gggtcacacgctgccctgcagcttggttttcctgtgacagccgcaccacaggtgcctgca
gtgtccacgtgtggtgccgaaggagctgagggtgccagcgcctggcttcgcgttgatcgc
gttgtgttggcgcgtcagcatctggtactgcttcgacagcttgagatggcgcaggatgag
ttgcctgcggagcgacttgcctctatcaaggtgcagctcatcacaaccagcctagcggag
ctggacttcaagaagacagtgcagacggagcagcgagccttcgagagccttgcgcacacg
aaagccacactgacgggtacactgctcgctgcccaggtgtcgctgcggcagacggaggag
gctctggaaagtgggtggcaggtgtcacggcgtcgagcgggcccccgaaagggaacgata
atggggcgtgtggttggtgattcgttgtgcaggcctgcctctccgcctccggcgctgccg
tgcatcgtgttcgatgagcgcgagtttcgctcttcactcccgtacgacctctaccgtcgt
ggcgtgcaaatcgttccactgacgctcacaacagctgactacgtgctctctcccgagtac
gctgtggagcgcaaaagccttcaggattacttccagtctgtcatgtctggacggatccgg
caccaacttgctgcgctttctcggaggtatgcgcgccccttatgtctcatcgagttccag
cgtggcctcccgtttcggttgacgcataccgccatctatgccaagacggccgtactcatg
gcctcctaccctcgcgtcagcttcatctgggcgcgcagctctgcccacgcagcggctatg
cttgtgctgctgaagaagtctgttgcggttgccaacgtggacccggctgatccgtcgctc
acagccactgctatgaacccaggtactgccgcggatgtaggcggggtcacggcaaccgcg
gcagagcgtgaggcggcacattacgcagcacgcgtcctgtccaaattcccgggcatcact
caccagaatgcgcctcgtgtgatgcagctctgcggctcgctcatcggacttgccacaatt
tcgcatgccgcgcttgtggccgtcatgggcgaggaggacgcagggaggctttacagtttt
ctccacaccccttttcacgagcgggtggactga
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