Porcisia hertigi: 94289123
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Entry
94289123 CDS
T10408
Symbol
JKF63_03024
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
phet Porcisia hertigi
Pathway
phet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
94289123 (JKF63_03024)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phet03019
]
94289123 (JKF63_03024)
Enzymes [BR:
phet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
94289123 (JKF63_03024)
Messenger RNA biogenesis [BR:
phet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
94289123 (JKF63_03024)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
Motif
Other DBs
NCBI-GeneID:
94289123
NCBI-ProteinID:
XP_067755490
UniProt:
A0A836HTC6
LinkDB
All DBs
Position
30:complement(1054223..1055500)
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AA seq
425 aa
AA seq
DB search
MQPRKTHTVLHLRQEAVTVQWSGGQEGCAVVLLSGRLELYRSPLTRNLRYTFSPETCVVL
ETFGEAVLQIEGDATTMRSPVSSALDEIHVLLDTMRVDAMLSIRERGKSVLSNSEEVKDA
WQGPRVLVVGENQWEREMVSRSLLNLAVRHGSPYGIGFVDVDVAMPVVGCPGTVCAVFVE
EPVTAPEDIDVMMPLSFFHGTPSVTSATRKRYLDLCVCIAQAATSLGFANSKFEAGGFLI
HSLSPSTEIQHDVLSDILSIFSVTHVVITGADLELEKFLYNSVLGRTVQFIRLPKLAGVQ
PPSAAVMEQRRRVQLERYFFGTARTALMAVRGVARVSDLVPLHAETLEPLDWNEVPDLCL
AAVVWADTAASAVEANVAGLVALLEVGKEFVSFLAPCGGELPKPFLVISPSLHLPRELVI
PLSAT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgcgtaagacacacactgttcttcacctccgccaagaggcggttacggtgcag
tggagtggtgggcaagaaggctgcgctgtggtgcttcttagcgggaggctagagctgtat
cgcagtccattgacacgtaatctgcgctacaccttttcaccggagacgtgcgtggtgctg
gaaactttcggtgaggcggttctgcagattgaaggtgatgcgaccaccatgcggtcacct
gttagtagcgccctcgatgagatccacgtgctgctggacaccatgcgcgtggatgcaatg
ctgtccatccgcgagcgaggaaagagtgtcttgtccaactctgaagaggtaaaggatgct
tggcaaggcccccgtgtgcttgttgtcggtgagaaccagtgggaaagggagatggtgtca
cgatcgctgcttaacctagcggttcgccacggcagcccatatggcatcggcttcgttgat
gtggacgttgcgatgccggtggtgggctgtccaggtacggtctgtgctgtctttgtggag
gagcccgtgacagcgccagaggacatcgatgtgatgatgccgctctcattttttcacggc
acgccctctgttacaagtgcgacgcggaagcgctacttggatttgtgtgtgtgtattgcg
caagcagccacctcgctcgggttcgccaactccaaatttgaggccggtggcttcttgatc
cactccttatccccctccacagagatccaacacgatgtgttgagtgacattctctccatt
ttttcggtcactcacgtcgtcatcaccggagctgacttggagctggaaaagtttctgtac
aactctgtcctgggaaggactgtacaattcattcgattgccaaagctggcgggtgtgcaa
ccaccaagcgccgctgtgatggagcaacgccggcgcgtgcagttggagcgctactttttc
ggcaccgcacgcacagctttgatggcagtgcgaggtgtggcgcgagtatcggatttggtt
cctctgcacgcagagacgttggaaccactggactggaacgaggtgccggatctctgtctt
gccgctgttgtctgggcggacacagccgcgtctgccgtggaggcaaacgtcgcaggtctt
gtcgcgctgctggaagtcggtaaagagttcgtcagcttcctcgcaccatgcggtggcgag
ctgcctaaaccgtttttggtgatctcgccatctctccacctgcctcgtgaacttgtaata
cccctgtctgcgacatag
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