Porcisia hertigi: 94289710
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Entry
94289710 CDS
T10408
Symbol
JKF63_03632
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
phet Porcisia hertigi
Pathway
phet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94289710 (JKF63_03632)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phet03041
]
94289710 (JKF63_03632)
03009 Ribosome biogenesis [BR:
phet03009
]
94289710 (JKF63_03632)
Enzymes [BR:
phet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
94289710 (JKF63_03632)
Spliceosome [BR:
phet03041
]
Complex A
U1 snRNP components
U1 related factors
94289710 (JKF63_03632)
Complex B
94289710 (JKF63_03632)
Ribosome biogenesis [BR:
phet03009
]
Eukaryotic type
Pre-60S particles
Helicases
94289710 (JKF63_03632)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
T4SS-DNA_transf
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
94289710
NCBI-ProteinID:
XP_067755872
UniProt:
A0A836IH53
LinkDB
All DBs
Position
28:complement(983552..985186)
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AA seq
544 aa
AA seq
DB search
MRRFTGALFGRRGAARCTTALFWAHHSFCPMFSAVCSFSTSRAMYEGSILATSSTLGDSH
APQKTHPSGASTEHDVTITDENGECVDVTPLNSFAELRDAPKWLAEGLKALKYPSTTDIQ
KFTIPLLAKGHNAIGLAPTGSGKTVAFSVPALMAFRRNPDNTPSVLVLAPTRELVQQTTK
VFESLGCGQVRVCEAYGGAPRDLQARRLHSGCDVLVACPGRLKDFLDAGDVSIRNLSFLV
FDEADRLLDMGFQVHLDEIMSHIDSASHPQTMMWSATWPESVQEMARRYLSNKRVLIRAG
TAGTGLQVNEHIKQELIFCNSFPERIEKLGSLVEAGTIDDNNDKLIIFVERQADTEDTAR
AFSHRLGIDARYVGTIHGGLSQRQRDKVMDMFKKNHIRLLVATDVASRGLDIPDVTCVVN
FQAPKNIDSYCHRIGRTGRAGRSGTAYTFIGQGDDGLAADLVDYLTRCRVTVPTELVELA
ERFRSRSRQRQDRFGRRDRGGFSRKENNSGFGRPRRDRGGSRPFTVRRSDSRSFDDRPPS
TLDW
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtttcacaggggccttgtttggcaggcgcggtgccgcacgatgcaccaccgcg
cttttttgggcccaccatagtttttgccccatgtttagcgcagtatgtagcttctctacg
agtagggcaatgtacgaaggttcgattctcgccacgagctcgactctcggcgactcgcat
gcgccgcaaaagacacacccgtctggggcgtcgacagagcacgacgttactattacggat
gagaatggtgagtgtgtcgacgtcaccccgctgaactcattcgcagagttgcgcgatgca
ccgaaatggctggcggaggggttgaaggcgctcaagtacccttcgacgactgacattcag
aaattcacgatacccttgctggccaagggacacaatgctatcgggctcgcaccgaccggc
tcagggaaaacggtggcgttctcagttccggctttgatggcgtttaggcgcaaccctgat
aacacgccgtctgttctggtgctagcacccacgcgggaattggtgcagcaaaccaccaaa
gtgtttgaaagcctcggatgtgggcaggtgcgcgtctgcgaagcctacggtggtgccccg
cgagatctacaagcgcgccgtcttcacagcggctgtgacgtgcttgttgcctgcccaggg
cgactgaaagactttctcgacgctggcgacgtatccattcgtaatctctcgtttctggtc
ttcgacgaggcagaccgccttctcgatatggggttccaggttcacttggatgagattatg
tcccacatcgactcagcctcacacccacaaacgatgatgtggtcagcgacttggccggag
tcagtacaagagatggcgcgtagatatttgtccaacaaacgtgttttgattcgagctggt
acagccggtacaggtctacaagtaaatgagcacatcaagcaggagcttatcttctgcaac
agcttccccgagcgcattgagaagctcgggtcgctggtcgaggctggaaccattgatgat
aacaacgataagctcattatttttgtggagcgccaggcggatacggaagacacagcccga
gcattcagccaccgacttgggatcgatgcgcgctacgtagggaccattcatggcggtctg
tcgcagcggcagcgggacaaggtgatggacatgtttaagaaaaaccacattcgcctcctt
gtcgcgaccgatgttgcttctcgaggcctagacattcccgatgtgacgtgtgtggtgaac
tttcaggcgccaaagaacattgacagctattgccatcgcatcgggcgcaccggccgcgcc
ggtcgaagcggtacagcctacacatttataggccaaggagacgacgggcttgcagcagac
ctcgtagactacttgactcgttgtcgtgtcactgtcccaacggagttggtggagcttgcc
gagcgtttccggagtcggtcgcgccagcgtcaggaccgattcggtcggcgtgaccgaggc
ggtttctccagaaaagagaacaacagcggttttggccgtccccgtcgtgatcgaggtggt
tcccgcccttttacggttcggagatccgactctcgcagtttcgacgaccgccctccgtcc
accttggactggtaa
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