Porcisia hertigi: 94290747
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Entry
94290747 CDS
T10408
Symbol
JKF63_04692
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
phet Porcisia hertigi
Pathway
phet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
94290747 (JKF63_04692)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phet03019
]
94290747 (JKF63_04692)
Messenger RNA biogenesis [BR:
phet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
94290747 (JKF63_04692)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
94290747 (JKF63_04692)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Spt46
Motif
Other DBs
NCBI-GeneID:
94290747
NCBI-ProteinID:
XP_067756691
UniProt:
A0A836I113
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Position
25:complement(721338..723212)
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AA seq
624 aa
AA seq
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MSNIKKVQTEADRLLKKVNEGLDAYDELHEKLANAPNASAKERLEGDLKRELKKLQRHRE
AMKSFMQNDDYKEKTKMQVSRKKIEERMETFRAIEREMKTKAFSNEGLASAALEKSDSAT
EQWLKDAIEEGRKKVELLEYEVQKANNNNRARRGKQQQQKSEYQIRLENLQTHFFKWESL
LRMVINEELDTDEVDDLQESIQKVLEDDVDLEVMEDMSIYDSFDIPEPKAKPVISFDPSD
FEEKKVQSPKTKAKTPTSTVQTKPSPSLTSLKDMPASPIPGKAASPGQVSPSTLPQASVQ
ASVQQQLPPSVCAPVYNDNGEEEPVPEWMDDDMDMANDATFGDDAMSGGRTIGSLAEMAS
ATNKVTQEWEKPPKPIKSPEPKPVKIADPSRAVAEEKPKLMPNAWERRAAEQQSRQKAQQ
QQVFEAVSPATSSGPVPAAAGAREPETMAATSPSTPAGNTHTDPIQSFPPMPGAAPGSKF
TPKKIHELLDMSLGHLPHTLDVQRQRPYEPPNAIDAIPYFPQEVLPVLSNKDIYHQMDLD
TLFFIFYYHQKSYQQYFAAKELKARSYRYHTMQHRWYQRLERPQTTTETGERGAYTFFDF
EDKWDHDRVGDFVFEYEYLENELH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacatcaagaaagtgcagacagaggcggaccgcctcctcaagaaggtcaatgaa
ggccttgacgcgtacgacgagctgcatgagaagctcgcaaatgcccccaacgccagtgcc
aaggaacggcttgagggcgacctgaagcgtgaactgaagaaactgcagcgccaccgtgag
gccatgaagagctttatgcagaacgacgactacaaggagaaaacgaagatgcaggtctcg
cgcaagaagatcgaagagcgcatggaaacgtttcgtgccattgagcgggaaatgaaaaca
aaggccttcagtaacgagggattagcctccgccgcactggagaagtccgactcggccacg
gaacagtggctgaaggacgcgatcgaggagggccgcaaaaaggttgagctgctcgagtac
gaggtgcagaaggccaacaacaacaaccgcgcgcgccgtggaaagcagcagcaacagaag
tcggagtaccagatacgtctcgagaacctgcagactcatttcttcaagtgggaatcgctc
ctgcgcatggtcatcaacgaggagctggacactgacgaggtggacgacctgcaggagtcc
atccagaaagtgctcgaagacgacgtcgatttggaggtgatggaggatatgtccatctac
gacagcttcgacataccggagccaaaggcgaagcccgtaatttcctttgaccctagcgac
ttcgaggagaagaaagtgcaatcaccaaagacgaaggcgaagacaccgacttcgacggtg
cagacaaagcccagcccgtccttgacctccctgaaggatatgccggcgtcgccaatcccg
ggcaaagctgcgtcgcctggccaggtctccccgtcgacccttccacaggcgtccgtgcaa
gcgtcggtgcagcaacagctgcccccttctgtctgcgctccggtgtataacgacaacggt
gaggaggagccggtgccggagtggatggacgacgacatggacatggccaatgacgccacc
ttcggcgatgatgcgatgagcggtgggcgtacgatcggctcgttggcggagatggcctcg
gcgacgaacaaagtgacgcaagagtgggagaagccgccgaaacccatcaagtcaccagag
cccaagcctgtgaagatagctgaccccagccgtgcagtcgcggaggagaagcccaagctg
atgccaaacgcctgggagcggcgcgccgccgagcagcaaagccggcaaaaggcccagcag
cagcaagtattcgaggctgtctcaccggcgacgtcatccggacccgtccctgcggctgcc
ggagcgagggagccagaaacgatggcagcgacctccccatcgactccagcgggcaacacg
cacacagacccgatccagtccttcccgcctatgcctggtgccgctcctggctccaagttc
acccctaaaaagattcatgagctcttggacatgtcactgggtcacctgccacacaccctc
gatgtgcagcggcaacggccctacgagccgccaaacgcgatcgacgcgatcccgtacttt
ccccaggaagtgctgccagtgctatcgaataaggacatctaccatcagatggacctcgac
acgctattcttcatcttctactatcaccaaaagtcgtaccagcagtacttcgccgccaag
gagctcaaggcccgctcctatcgctatcacacaatgcagcaccggtggtaccaacggctg
gagcggccgcaaacgacaactgaaacgggggagcgcggtgcgtacacctttttcgacttc
gaggacaagtgggatcacgaccgcgtcggcgacttcgtctttgagtacgagtacctcgag
aatgaactccactga
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