Porcisia hertigi: 94290996
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Entry
94290996 CDS
T10408
Symbol
JKF63_04948
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
phet Porcisia hertigi
Pathway
phet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94290996 (JKF63_04948)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phet03019
]
94290996 (JKF63_04948)
03041 Spliceosome [BR:
phet03041
]
94290996 (JKF63_04948)
Messenger RNA biogenesis [BR:
phet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
94290996 (JKF63_04948)
Spliceosome [BR:
phet03041
]
Complex B
Other components
Prp19-related factors
94290996 (JKF63_04948)
Complex C
94290996 (JKF63_04948)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_PRP39_N
NRDE-2
Suf
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
94290996
NCBI-ProteinID:
XP_067757119
UniProt:
A0A836I4I0
LinkDB
All DBs
Position
23:709874..712258
Genome browser
AA seq
794 aa
AA seq
DB search
MDGDPRVSALQWEVTRETTASPKTWAELARTTAAVPATDPVERANAVTLVYERAVRAFSS
SYKLWTAYIRYRQQETDRLCGPNEWFQAVRDVYERALVELPKMPMLWVGYMEFIIAFQVP
RVTMARHVLARGLAALPATQHHHLWKVAKRWCAMPVVPSATMRVVWRLYLSFQRSLQAKR
DYFQVLVQKGDFNGFLQECVHLGLPKNSDKAAIEERDQLFGDVSFWETVQTALRAKGWRF
TGDIGPLRELFALGRGRCASPVELCMAFAAFLYGQGYMQEGRQELRQLLDEAPEAQTLTT
LYHLAVEVEDQLVESFAVDPELKNLDDAAYTSVVQHIFGTVDPLSHLERLVREFPLLLNQ
AQLRNSPHNAALWLKRVELVQEDVCAGRSTFDDLVALYRQAIQQCTAGMSRVDGAAAQLF
SSCAQTLIRGGKLDSAVSVLSEGAWCVPFTSSALNIQLLGLLVEALLMSSASPLSVRDAL
AERLTASSRSSGSKRSRNGLLQSSVALPHVVHHPHAWIMWCDVCTAYDATNAAAWRRLVE
ALASSPAFSAEAACYVAHKAYACKHESIALMVLERAVAATRQRPTAQLFVLEQYLSFLHV
RDGRQVPLHQFREVFRLVQQVTPVAIRTTPAAVIDLHVSCAYMEAEIGLYGTAVRMMQEI
AFVAIVALRGAGEHLRLLQAILEHSITFTEQRRGYDSVRTYCGALVQRLQDTILLQRVAL
QWAAIEKRSGNIPQAHLILDACGDSQNPSTVHGEVYWRLWESLCTSVEEFEKVARRRQQA
AIRFGKRETAKPSL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatccacgagtaagtgccctacaatgggaggtaaccagggagaccacagcg
tcacccaaaacgtgggcggagctggcccgcaccaccgccgcggtgcccgcgactgatccg
gtggaaagggccaatgcagtgacgctcgtgtacgagcgtgccgtgcgtgccttttcttct
tcctacaagctctggacggcctacattcgctatcgccagcaggagacagataggctctgt
gggccaaacgagtggttccaggctgtgcgcgatgtttatgagagggcgttggtggagctt
cctaagatgccgatgctctgggtcggttacatggagtttatcattgcttttcaagtgcca
cgtgtgactatggcgcggcacgtgcttgcgcgtggcttggctgcgctaccggcaacccag
catcaccatctctggaaagttgcaaagcgttggtgtgctatgcctgttgttccgagtgct
acaatgcgggtcgtttggcggctttatctctcttttcagcgctcactgcaggccaagcgg
gattactttcaggtgcttgtgcaaaagggtgacttcaacgggttcctgcaggagtgtgtg
cacctggggttgcccaaaaactccgacaaggccgccattgaggagcgtgaccagctcttt
ggcgacgtgagcttttgggaaaccgtacagacggcactgcgggcgaaggggtggcgcttc
acaggtgatattggtcctttgcgcgagttgtttgccctgggcagggggcggtgcgcctct
ccagtcgagctttgcatggctttcgccgcttttctttacggtcaagggtacatgcaggag
ggtcgacaggagctacgtcagctgctcgacgaggcacctgaggcgcagacgctgaccacg
ctctaccaccttgctgtggaggtggaggaccaactagttgagtctttcgctgtagacccc
gaactcaagaacctcgacgacgccgcgtacaccagcgtggtgcagcatatcttcggtaca
gtcgacccgcttagccaccttgagcggcttgtgcgcgagttcccgctgctcctcaatcag
gcacagctgcggaacagcccacacaatgcggctctctggctgaagcgtgtggagctggtc
caggaagacgtctgtgcgggccgctccacctttgacgatcttgttgccctgtatcgacag
gctattcaacagtgcactgcagggatgtcgcgtgtggacggcgcggcggcgcagctgttc
tcttcgtgtgctcagactctcatccgtggcggcaagctagacagcgccgtatcggtgctc
agtgagggcgcctggtgcgttcccttcaccagctctgcgctcaacatacagctcctgggt
cttcttgtagaggccctactcatgtcgtctgcgtcacccttgtccgtgcgggatgctctg
gcggaacgactgaccgccagctctcgcagtagcggctcaaagcgctctcgaaatgggctg
ctacagtcgagcgtagccttgccccacgtggtacaccacccccacgcgtggatcatgtgg
tgcgatgtctgcactgcctacgatgcaaccaacgcggctgcttggcggcggcttgtcgag
gcacttgctagctccccagctttctccgcagaagctgcctgttatgtagcccacaaggcc
tacgcgtgtaagcacgagtccattgctctgatggtgttggagagggctgtcgctgctaca
cggcaaaggcccacagcgcagctcttcgttctggagcagtatctctcctttctacacgtc
cgagacggtcgacaggtgccgctgcatcagtttcgtgaggtgtttaggcttgtgcagcag
gtgacacctgtcgctatacgcaccacacctgcggccgttatcgatctgcacgtcagctgt
gcgtacatggaggcagaaattggcctctacgggacagctgtccgcatgatgcaggagatt
gcctttgtcgctatcgtggcgctgaggggtgctggtgagcacctccgtctcttgcaggca
atcctcgagcattctatcacctttacggagcagcgcaggggctacgattcggtacgcacg
tactgtggagcgctggttcagcgtctccaagacacaattttgttgcaacgtgttgcactt
caatgggccgcaatcgaaaagcgctcgggtaacataccacaagcgcacctcatcctcgat
gcatgtggagacagccagaatccgtccaccgtccatggtgaggtttactggcggttgtgg
gagtctctctgcaccagtgtggaggagtttgagaaggtggcgcgtcgtcgtcagcaggca
gcgattcgatttggaaaacgcgagacggcaaagccatctctgtaa
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