Porcisia hertigi: 94291190
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Entry
94291190 CDS
T10408
Symbol
JKF63_05144
Name
(RefSeq) hypothetical protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
phet Porcisia hertigi
Pathway
phet03013
Nucleocytoplasmic transport
phet03015
mRNA surveillance pathway
phet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94291190 (JKF63_05144)
09122 Translation
03013 Nucleocytoplasmic transport
94291190 (JKF63_05144)
03015 mRNA surveillance pathway
94291190 (JKF63_05144)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phet03019
]
94291190 (JKF63_05144)
03041 Spliceosome [BR:
phet03041
]
94291190 (JKF63_05144)
Enzymes [BR:
phet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
94291190 (JKF63_05144)
Messenger RNA biogenesis [BR:
phet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
94291190 (JKF63_05144)
Spliceosome [BR:
phet03041
]
Complex C
Other components
EJC/TREX
94291190 (JKF63_05144)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
94291190 (JKF63_05144)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
EH_Signature
Motif
Other DBs
NCBI-GeneID:
94291190
NCBI-ProteinID:
XP_067757476
UniProt:
A0A836LI76
LinkDB
All DBs
Position
21:complement(589593..590900)
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AA seq
435 aa
AA seq
DB search
MSSALADFDGDDVKTTVVAAQPMGVGMGTHSAVALGGFQDFCLKSELSNAIRENGFEHPS
EVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQVEKVPQGQKPYCQAVVVVHAREL
AYQIEQEFKRFSKYLPYATTGVFFGGIPEDENVKQLKKEVPAIIVGTPGRLKALIQNKAF
DTTHVKWFVVDEFDRCLEDVKMRRDVQEIFMKLPKEKQVMMFSATMTDELRDVAKKFMKD
ATEIYVDQRAKLTLHGLVQFYMNVTEPEKTRRLAEILDVVEFNQAIIFTSSVERCEALNR
QLQQMKFPSQAVHSRMNQEERLRVYESCKANNTRIMVATDLFGRGVDFDRINLVVQYDMA
SEADSYLHRVGRAGRFGTKGLTVAFITTDEKEIKRENRTYTDSGIMKEVQERFEMKVEEL
TDINTQLNESQYMNK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgctcttgcggactttgacggcgatgatgtcaagaccaccgttgtggcggcg
cagccgatgggggtcggaatgggcactcacagcgccgtcgccctcggtggcttccaggac
ttctgcctgaagagcgaactctcgaacgccattcgtgagaacggcttcgagcatccgtcg
gaggtgcagcaccaggcgctgcccaaggcgatgctcggcgcggacattcttgcgcaggcc
aagtcaggtatgggtaagactgccgtgttcgtcttcgcactgctggagcaggtcgagaaa
gtgccccaggggcagaagccgtactgccaggccgttgtagtggtgcacgcccgcgagttg
gcctaccagatcgagcaggagttcaagcggttcagcaagtacctcccgtatgcgaccacc
ggtgtgtttttcggcggcatcccagaggacgagaacgtgaagcagctcaagaaggaggtg
ccggcaatcatcgtgggcaccccaggccgcctgaaggctctcatccagaacaaggcattc
gacacgacacacgttaagtggttcgttgtcgacgagttcgaccgctgcctagaggacgtg
aagatgcgccgtgacgtgcaggagatcttcatgaagctcccaaaggagaagcaggtcatg
atgttctccgctacgatgacggacgagctgcgcgatgtggcgaagaaattcatgaaggac
gcgacggagatttacgtggatcagcgcgcaaagctcacccttcacggtcttgtgcagttt
tatatgaacgtcacggagccggagaagacgcgtcggctggcggagattctcgacgttgtg
gagttcaaccaggcaattatctttacttcttcggtggagcgctgcgaggcgctgaaccgc
cagctgcagcagatgaagttcccttcgcaggccgttcactcacgcatgaaccaggaggag
cgcctgcgcgtctacgagagctgcaaggcgaacaacacccgcatcatggtcgccaccgac
ctcttcggccgaggcgtcgactttgaccgaatcaacctcgttgtgcagtacgacatggca
tcggaggcggacagctaccttcatcgcgtcggccgtgccggtcgcttcggcacgaaaggg
ctgacggtggccttcattacgacagacgagaaggagattaagcgcgagaaccgcacctat
acggatagcggcatcatgaaggaggtgcaggagcgcttcgagatgaaggtcgaggagctg
acggacatcaacacgcaactgaacgagagccagtacatgaacaagtaa
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