Porcisia hertigi: 94291622
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Entry
94291622 CDS
T10408
Symbol
JKF63_05588
Name
(RefSeq) hypothetical protein
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
phet Porcisia hertigi
Pathway
phet03040
Spliceosome
Brite
Enzymes [BR:
phet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
94291622 (JKF63_05588)
Spliceosome [BR:
phet03041
]
Complex C
Other components
Step II factors
94291622 (JKF63_05588)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
94291622
NCBI-ProteinID:
XP_067756811
UniProt:
A0A836L9D5
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Position
24:186385..189600
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AA seq
1071 aa
AA seq
DB search
MSADHDLKRPREKYTVNQVHPLLSAKGVDASTQEQALRFISQIEAGELLEHDRDTTEAVM
TGADESAQWAYGSEYYLCYNGNNDKEHTSGNAAAAREGGSDGQAGKARKIVVNFTMALPS
FFFSGHDFETSTRSGTAAATAREHDVDDDGGGGGGVDVDRRGELFTSRFLHEALRTTDVD
IIVPVVSHSCSLAVSALKGSQALLELKRLMDRERTNRDVMDTSKSSLTQLLQKDVYGCVV
KADAQAVATGSSGSHPNHAHGGRVTNLAADHLNDGDTDVGEAEYLQRQLRLEQERLAEVT
RLHGVPGASPSTAAATRAGAEDSQWGSGQEKRRQRKEQQLSLIEERKAQMETLADKPAEV
ERRDAMRRQRESLPIYDCKEELLRYIGENAVTVVVGETGSGKTTQLVQYLHQRGYARQGK
IIGCTQPRRLAAIGVARRVSDEMGCALGTTVGYSIHLDDTTTAETHVKFMTDGVLLRETV
NDPSLDKYSVVMLDEAHERSVDTDVLMGVLKLALRRRGDLKLIVTSATMDVRKFSAFFGN
APCYEIPGQTFPVKIHYSPTPIVDYVIEAVFRVCQLHLQMPLEGKHDILVFMTGREDVYG
TCELIRRRLTELSPQHLSTLLIIPCLSEATSASTSEFGLLEATPPGMRKVVVATNVAETS
LTIDGVRYVVDCGFMKTNVYRPTIGMNTLQRYPTSQAQAGQRKGRAGRTTEGTCYRLYTE
EQYAKEMLPNSVPEIQRSSVDSVVLLLKSIGIQSLRDFDFMDAPPAANVRNSMFHLWVLD
FLDDSGAITEQGQKALEFPISPVLAKLLLESAKVGCTLEMARVVAMISADPKNLFELPKG
REKVAQQHHSRFYANDSDHLTLLHVFTQYVEHGRSRQWAQDHFLHAPTLARANDVFAQLI
EKLRKVHLPIQSCGHEAIDKVRYCFAKAFAMQAAQRSDRRWTDYRPLLNAGVTCAVHPAS
AVHARSEMPAYIIYNDLLLTHKEYLVMVTAVEPEWLIEGSRGIYAMRHGETTSSLAAGAA
SPVAGETPTPTLLPSSPTAPSTSNTKAAAVVKAPAKKATFNMMITKRRPNI
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgatcatgacctcaagcggcctcgggaaaaatatacagtgaaccaggtgcac
ccgctcctgtcagcaaagggcgtggacgcttccactcaggagcaggcgctgcgcttcatc
tcccagatagaagcgggcgaactcctcgaacatgaccgcgacacaaccgaggcggtcatg
acaggcgccgatgagtccgcgcagtgggcatacggcagcgagtactacctttgctataac
ggcaacaatgacaaggaacacacctcaggtaatgcggcggcggcacgagaaggcggcagc
gacggtcaagcaggcaaggctcgcaaaatcgtggtcaactttactatggcccttccctct
ttcttcttttctggccacgacttcgagacaagcacgcgctccggcacggcagcagcaacc
gcacgagagcacgacgtcgacgacgacggtggtggtggtggtggtgtagacgtcgacaga
cgcggtgaacttttcacctcccgcttcctgcacgaggctttgcggacaaccgatgtcgac
atcatcgtaccggttgttagccactcatgcagtcttgctgtgagcgccttgaagggtagt
caggccctcctggaactcaagcggctgatggatcgagaacgcacaaaccgcgacgttatg
gacacttccaaatcgagtctgacgcagctcttgcagaaggacgtgtacggctgcgtggtg
aaagcagacgcacaggcggtggcgacggggagtagtggctctcaccccaatcacgcgcac
ggcggccgcgtcaccaacctggctgctgaccatctaaacgatggtgacaccgacgttgga
gaagccgaatacctccagcgtcaactgcgcttggaacaggagaggctcgctgaagtgaca
cgacttcacggtgtgccgggtgcctccccaagcactgccgcggccactagagctggtgcg
gaggactcgcagtggggcagcggccaggaaaagcgccggcagcgcaaggagcagcaactc
tctctcatcgaggagcgcaaggcacagatggagacgctcgccgacaaacctgctgaagtg
gagcgccgagacgccatgcgccgccagcgcgaatcgctgccaatttacgactgcaaagaa
gagctcctgcgctacatcggtgagaacgccgtcacagtggtcgttggcgagaccggcagc
ggcaaaacaactcagctcgtccagtacctccatcagcgcggctacgcacggcagggaaaa
ataattgggtgcacgcagccgcgccgactcgctgcaatcggagtggcgcgtcgtgtcagc
gacgagatgggctgcgcgctcggcaccacggtgggctactcgatccacctcgatgatacc
accacagcagaaacgcacgtgaagttcatgacagacggtgtgcttctccgcgagaccgtc
aacgacccgtcactcgacaagtacagcgttgtgatgctggacgaagctcacgagcgctca
gtcgacaccgatgtgctgatgggcgttttgaagctcgccctgcgccgccgtggcgatttg
aaactaatcgtcacatctgccacgatggacgtccgcaagttctccgccttcttcggcaac
gcgccgtgctacgaaattccaggtcagacgttcccggtcaagattcactacagcccaacg
ccgatcgtcgactatgtgatcgaggccgtgtttcgtgtgtgccagctgcacctgcagatg
ccgttggagggcaaacacgacatcctcgtattcatgacagggcgggaggacgtctatggc
acatgcgagttgatccgccgtcggctgacggagctcagcccacagcaccttagtactctc
ctcattatcccgtgtctctcagaggcgacctcggcctcgacctcggagtttgggcttctc
gaggccacgccacccggcatgcgcaaggtggtagtcgcaaccaacgtcgccgagacatcg
ctgacaattgatggcgtgcgctacgtcgtggactgcggatttatgaaaacaaacgtctat
cggccgacaattgggatgaacacgcttcagcggtatcccacctcgcaggcgcaggcgggc
cagcgcaaaggtcgcgccggtcgcaccaccgaagggacgtgctaccgcctctacacagag
gagcagtacgcaaaagagatgctgccgaacagcgtacccgaaatacagcgtagcagtgtg
gacagtgtggtgctgctgctaaagagcatcgggatccaaagccttcgtgacttcgacttc
atggacgcaccgccagcagccaacgtgcgaaatagcatgtttcacttgtgggtgctcgat
ttccttgacgactccggcgcaatcacagagcagggccagaaggcgctggagttcccgata
tcccctgttctggcgaagctcttgttggagagcgccaaggtgggatgcacattggagatg
gcccgcgtcgttgccatgatctccgctgacccaaagaatttgtttgagctcccaaagggc
cgtgagaaggtggcacaacaacaccacagccgcttctacgctaatgactcagaccacctg
acgctgctgcacgtcttcacgcagtatgtggagcatggccggtcacgacagtgggcacag
gaccacttcctccacgcccccacacttgccagagcgaacgacgtgtttgcacagctgata
gaaaagttgcgcaaagtgcatctgcccattcagtcttgtggccacgaagcgattgacaag
gtgcgctactgcttcgccaaggcttttgccatgcaggcagcgcaacgatcggatcggcgc
tggacagactatcgcccactgctgaacgctggcgtaacgtgcgcggtgcacccagcctct
gctgtgcacgcgcgcagcgagatgccagcctacatcatctacaatgatctgctgctcacc
cataaggagtacttggtgatggtgacggcagtggagccggagtggttgatcgagggctca
cggggcatatacgcaatgcggcacggggaaacgacgtcgtcgctagcggcgggcgctgcg
tcacctgtggcgggtgaaacgccgacacccacgttgttgccttcgtccccgacagcaccc
agcaccagcaacacgaaagccgcggcggtggtgaaggcacccgccaagaaggccacgttc
aacatgatgatcacgaagcgccgaccaaacatatga
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