Porcisia hertigi: 94292673
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Entry
94292673 CDS
T10408
Symbol
JKF63_06647
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
phet Porcisia hertigi
Pathway
phet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
94292673 (JKF63_06647)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phet03019
]
94292673 (JKF63_06647)
Messenger RNA biogenesis [BR:
phet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
94292673 (JKF63_06647)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
94292673 (JKF63_06647)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
94292673
NCBI-ProteinID:
XP_067758489
UniProt:
A0A836I0W5
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All DBs
Position
14:9592..10479
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AA seq
295 aa
AA seq
DB search
MSSSLVIVGDSICGGSDVHKLNTTSEEVYLRGFNTFPGNNPSDLALLHEGAGEIVAAING
HVEVTDRVISVKGLLPRYQAEIGDVVVGRVLEVSGNKWRVDVNSAQAAIMLLSNVTEPGG
MLRRRGRGDELGMRQLFDQDDLVAAEVQRISPDGVLSLHTRAAEKYGRLSGLGILVSVRP
SLVKRAKHQFVELPDWSTQLIIGINGNIWICSTQPRVPNTDEENVIDVRQKVVRVANCIK
ALGAAQVQIHPASIKAIVSASLEASISVFDVLLDEHRDVLLAGVTELWGMKRRRQ
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagccttgtgattgtgggtgactccatatgcggtggcagtgatgttcataaa
ttgaacacgacctccgaagaggtttatcttcgtggctttaacacgttcccagggaataat
ccaagcgacctagcactgctccacgaaggcgcgggcgaaatcgtagctgcgatcaatggg
catgtagaggtgacagatcgcgtaatatcggtgaaagggcttctaccgcggtaccaagct
gaaatcggtgatgtggtggtgggccgtgtcttggaggtgtcaggtaataagtggcgggtg
gatgtaaattctgcccaagcggcaattatgctgctctcaaatgtaacggaacctggaggc
atgctgcgacgtcgaggccgcggggatgagctcggtatgcggcagctctttgaccaagat
gatcttgttgctgccgaggtgcagcgcatctctccagatggtgttttgtcacttcacaca
cgtgcagccgagaagtacggtcggctatcagggcttggaattttggtgagcgttcgtccc
tctttagtgaagcgtgcgaagcatcaatttgtggaacttcctgattggagcactcaactg
atcattggcattaatggcaacatatggatctgctcgacacaaccccgtgttcccaacacg
gatgaggaaaacgtcatcgatgtacgacagaaggtggtgcgcgtcgcgaactgcatcaaa
gcattgggagctgcccaagttcagattcacccagcgtctataaaggcgattgtttcggcg
tcattagaggcaagcatctctgtgtttgatgtgttactcgacgagcaccgagatgtactt
ttggcaggtgttactgaattgtggggaatgaagcgtcgccgccagtag
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integrated database retrieval system
