Porcisia hertigi: 94292971
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Entry
94292971 CDS
T10408
Symbol
JKF63_06947
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
phet Porcisia hertigi
Pathway
phet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
94292971 (JKF63_06947)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phet03021
]
94292971 (JKF63_06947)
03019 Messenger RNA biogenesis [BR:
phet03019
]
94292971 (JKF63_06947)
Transcription machinery [BR:
phet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
94292971 (JKF63_06947)
Messenger RNA biogenesis [BR:
phet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
94292971 (JKF63_06947)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCHC
zf-CCCH_3
zf-CCCH_9
zf-CCHC_2
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
94292971
NCBI-ProteinID:
XP_067759253
UniProt:
A0A836LJG2
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All DBs
Position
9:complement(560342..561367)
Genome browser
AA seq
341 aa
AA seq
DB search
MFVDDAAGTHFDFEDALPKEQSRTEKKLEICQDFQRGRCRLGDACPQRHIISAYRTVQTK
VCKHWLRGACVNGDNCLYLHEYDNRYVPQCAFFERVGECTNPECPFLHTRPNESQPECAA
YRRGFCPLGPKCRLRHVKCESACPYYLAGFCPLGPRCPLGHPIQERHDRDAVSKRILAKM
IVERADDPTFNRSATCYRAGCLDPGHLAPDCPGPQHSVLHKALGALQEPGQSTDAFENGG
RGGGGGGGGSHRRCFLCDQEGHTVKDCPMNTHRNQHRAGGGGGGPGLSHSSAGGAGIGNR
RRVRREGDVGAAPGANGGGGSAGGGGFGGVGGRRRPGRDQY
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttgacgatgccgctggcacgcactttgacttcgaagacgcgctgcccaaggag
cagtcccgcaccgagaagaagttggaaatctgccaggacttccaacgtggccgctgccgt
ctcggcgatgcttgcccgcagcgccacatcatctctgcctaccgaacggtccagacgaag
gtgtgtaagcactggctgcgtggcgcctgcgtcaacggggacaactgcctgtaccttcat
gagtacgataaccgctatgtaccgcagtgcgcctttttcgagcgcgtaggcgagtgcacc
aaccctgagtgcccgttcttgcacacaagaccgaacgagtcacaaccggagtgtgccgcc
taccgtcgtggtttttgccctctgggtcccaagtgccgcctccgacatgtcaagtgtgag
tcggcatgtccatattaccttgctggcttctgcccgttaggtccccgctgcccgctagga
caccccatccaagagcgccacgaccgcgacgccgtgtcgaagcgcatcttggccaagatg
attgtggagcgtgctgacgacccgaccttcaaccgcagcgcaacttgttaccgggcgggt
tgcctcgaccccggtcatctcgcaccggactgcccaggcccacagcacagcgttctacac
aaagcccttggcgcgctgcaggagcctggccaatctacggacgcttttgagaacggtggg
cggggcggcggcggcggcggcggcggctcccaccgtcgatgcttcttgtgcgaccaggag
ggccacacagtaaaagactgtccgatgaacacacaccgtaatcagcaccgtgctggaggt
ggtggtggtggtcctggtctctctcacagcagtgccggcggggctggaataggtaaccgt
cggcgcgtgcggcgagagggcgatgtcggtgctgctcctggtgcgaatggtgggggaggc
agcgctggtggtggtggtttcggtggcgttggcggtcgccgtcgcccgggtcgtgatcag
tactga
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