Paenibacillus hexagrammi: L0M14_03725
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Entry
L0M14_03725 CDS
T10205
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
phex Paenibacillus hexagrammi
Pathway
phex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L0M14_03725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phex03400
]
L0M14_03725
Enzymes [BR:
phex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
L0M14_03725
DNA repair and recombination proteins [BR:
phex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
L0M14_03725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
DUF570
Motif
Other DBs
NCBI-ProteinID:
UJF34331
UniProt:
A0ABY3SK41
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All DBs
Position
826118..827245
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AA seq
375 aa
AA seq
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MPKIGSHVSFSDKGLLNAAEEAISYGSSTFMIYTGAPQNTRRKPIETQFIEEGKALMDKH
GIHEIVVHAPYIINLGSYKEDTFKLAVRFLQEEIRRTDYLGVRNIVLHPGAYTDKDAEYG
IARIADGLNEVLAGVKDTQVNIALETMAGKGTEIGRSFEEIAAIMDKVADNHKLTVCMDT
CHIHDAGYDIVNDLDGVLDHFDRVVGLSKLGVIHLNDSKNARGASKDRHAPVGSGWIGFQ
AMNNVARHEKLQHLPMILETPWIGKEDKSQRPMYEAEIALLSGNLSERFGGDFLDHVERI
DHLLTKKDIHYRDFVLNTWDLLKSDAKAKKADGREPMERLYDIIHEERLLPELTEEQINH
RLTVWFAGQEALKND
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaattggatcacacgtctctttttccgataaaggattattaaatgctgctgag
gaagcaatttcttatggttcttccacatttatgatatacacaggtgcaccgcaaaatacc
cgtcgaaagccgatagaaacacagtttattgaagaaggcaaagctttgatggataagcat
ggcattcatgaaattgtcgtgcatgccccatatatcattaatcttggttcctataaagaa
gacactttcaagttggctgtccgtttcctacaagaggaaattcgacgcaccgattatctt
ggagttcggaatattgtcttacatccgggagcttatacggataaagatgccgaatacggt
attgctcgtatcgctgatggacttaatgaagtattggctggagtaaaagacacacaggtg
aatattgctctggaaacgatggcgggcaagggtacagaaatcggaagaagttttgaagaa
atcgctgcgatcatggacaaagttgcggataatcacaaattgacagtatgtatggatact
tgtcatatacatgatgcaggatatgatattgttaatgacctggatggtgtactggatcat
tttgatcgtgtggttggtttgagcaaattaggcgtcattcacttgaacgatagtaagaat
gcgcgaggagccagtaaagaccgacatgcccctgtaggttcaggatggatcggctttcaa
gcaatgaataatgttgcacggcatgagaagctgcagcatctgccgatgatcctcgagact
ccatggatcgggaaagaggataagtctcagcgccctatgtatgaagcagagatagcactt
ttatcgggaaatctgagtgaacgctttggtggagatttccttgatcatgtggaacgtatc
gatcacttgcttacgaagaaagacattcattatcgtgactttgttttgaatacttgggat
ttgttaaaaagcgatgcgaaggcaaagaaagcggatggtcgtgaacctatggaacgttta
tacgatatcattcacgaagaacgtttgctgcccgaattaaccgaggaacagattaatcat
cgcttaaccgtgtggtttgcaggccaagaagcactcaagaacgactaa
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