Paenibacillus hexagrammi: L0M14_07835
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Entry
L0M14_07835 CDS
T10205
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
phex Paenibacillus hexagrammi
Pathway
phex03030
DNA replication
phex03430
Mismatch repair
phex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0M14_07835 (holA)
03430 Mismatch repair
L0M14_07835 (holA)
03440 Homologous recombination
L0M14_07835 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phex03032
]
L0M14_07835 (holA)
03400 DNA repair and recombination proteins [BR:
phex03400
]
L0M14_07835 (holA)
Enzymes [BR:
phex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0M14_07835 (holA)
DNA replication proteins [BR:
phex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L0M14_07835 (holA)
DNA repair and recombination proteins [BR:
phex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L0M14_07835 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
UJF35039
UniProt:
A0ABY3SLV8
LinkDB
All DBs
Position
1829053..1830072
Genome browser
AA seq
339 aa
AA seq
DB search
MDVKKAWKDIQAGRTAPVYLCYGPEKYRMREFIQHVSDHLIEPEHREFAVSKFDLGETSL
SAVLEDAETLPFMVPKKFIIATNAIFFTGARDTSKVEHDLERLIDYLKSPAEHSVIIFTV
DAEKLDERKKVVKSLKEKEAVIPFLSLSSEELQSWVVKQAQKLDFTFASGAADQLILYTG
GNLQVLSAELEKISLYIGSGGVATEAVIDQLVARSTEQNVFILIEDIVNLRLDRAFVILE
ELLKQREEPIKIAALIARQFRIMLQVKELGKQGYSQQQMASQIGLHPYAVKIAEGQAKKY
EANKLSVILARLADLDYQMKSGRIDKVLGLEMFLLQLAA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaaaaaagcgtggaaagacatacaagcaggtcgaacggcgccggtgtacttg
tgctatggtcctgaaaaatatagaatgagagagtttattcagcatgtatccgatcatttg
atcgagccggaacatagggaatttgcggtcagtaaatttgatctgggtgaaacgagtttg
tcagcagttctggaagatgcagagacgcttccttttatggtacccaagaagttcattatt
gcgacgaacgcgatattctttactggtgccagggatacgagtaaggtggagcatgaccta
gagcggttgattgactacttgaaatctccggcagagcactcggttatcatattcacagtc
gatgccgagaagctggatgaacgtaagaaagtcgtaaaatcactgaaagagaaggaggcc
gttattcctttcctctctttatcctcagaggagttgcagagctgggtggtcaaacaagcc
caaaagcttgattttacatttgcgtctggagccgccgatcaattgattttatacaccgga
gggaacctgcaggtattatctgctgagcttgagaaaatctccctttacataggaagcggt
ggtgtggctacagaggcggtcattgatcagttagttgcccgaagcactgagcagaacgta
tttatcttgatcgaggatattgtcaacctgcgcctggatcgcgcctttgtgattctggag
gagctgctgaagcaaagagaagagcctatcaagattgctgccctcattgccagacagttc
cgaatcatgcttcaagtgaaagagctgggcaaacaagggtactcccagcagcaaatggca
tcgcagatcggcttgcatccgtatgccgttaaaatcgcagaagggcaagcgaagaagtat
gaggcaaataagctgagtgttatattggcaagactagcggatctcgattatcaaatgaag
agcggacgcatcgataaggttttgggactagaaatgttcttgcttcaattagctgcataa
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