Paenibacillus hexagrammi: L0M14_07960
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Entry
L0M14_07960 CDS
T10205
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
phex Paenibacillus hexagrammi
Brite
Enzymes [BR:
phex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L0M14_07960 (addB)
DNA repair and recombination proteins [BR:
phex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
L0M14_07960 (addB)
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Other DBs
NCBI-ProteinID:
UJF35064
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Position
1856336..1859869
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AA seq
1177 aa
AA seq
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MSIRFVIGRAGSGKSRRCLEEMKQQLLANPEGEPLVLLVPEQATFQAEHAIVSDPGIGGM
IRAQVLSFHRLAWRVMQEEGGTARQPIDDTGKQMLLTSILHTYKHQLRVFGHASEQLGFV
DRLNQLFTELKRYRVSADQLEAFEKSNVQAIGGSGLLTDKLHDIRLVFRVFESELSKQYL
DGEDYLTLLAEQTAHSAYLRSADVWIDGFHGFTPQELAVVGQLFAVCKSVTITLCLDRPL
EAEDQPDELDLFHPTATTMVRLQQLIWQLGIGPAEVVLLQPETFPRFQESPALAHLEASY
DKRIGGADSKFVSEEGVQLEGQLVIKEAVNRRAEVEGAVRDILHLVREKHVRYRDIAIMV
RNMEGYSDLLKAVLTDYGIPHFFDQKRTVLHHPLIEFIRSALEIVQHNWHYDAVFRCVKT
DLLLPGDDITLRERMDKLENYVLAFGIQGYRWTDGKPWAYRHRMNLEQPDLAEDAAVSSE
LERLNEARMWVVTPLHTFAGRLKKAKNVQQQVEALYGLLMDVEAPNKLDAWSLRELQSGH
PEKAREHGQMWNSVMDMLDQLVETMTDDSVSTELFAALIETGAESMKLGLVPPSMDQVLI
GSMDRTRSSGIRYAYVLGVNDGVIPAQMDEKGVLTESERESLLMSGLPMADGSTRKLLDE
QFIVYTSLTVPSNRLWLSYPLADEEGKSLLPSELIKQLRRLFPQVREQLLLAEPSPDSNE
AEQLEYLAHPNQALSYLAVRMKQWMQGGTMPELWWDVYNWYAVKPEWLNKMNALIQAITY
TNKEHSLSGHTSHLLYGKHLRASVSRMEKYVACPFAHFLSHGLRLQERRVFRLDAPDIGQ
LFHAALNQFVQKLQQDQLDWGALTAEECMERSSQVVDELAPRLQGEILLSSSRYAYIARK
LKQIVGRAAAVLGEHARHGQFEPLGLEIDFGPGKELPPLTFQLENGCTMEIIGRIDRVDR
ADGEQGVLLRVIDYKSSQTSLHLSEVYYGLSLQMLTYLDVILTHAEQWLGIEAKPAGVLY
FHVHNPMLQQKNAIDPAEVDKELRKRFKMKGLVTADADVAGLMDGQLIDAPGHSQLIPVA
LKKDGSFYTNSSVATDAQWDILRNYVRKQVRRIGTDITNGHVDIAPFRLGKKTACMHCSY
RSVCQYDPLFEGNEQQVWKQRPKDQVWSEMEQHTAPK
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtctatacgatttgtgatcgggcgggccggaagcggaaagagcaggcgctgtctggaa
gaaatgaaacaacagcttttggcgaatccggaaggcgaaccgctagttctgctcgtacct
gagcaggctacgttccaggctgagcatgccattgtgtccgatccgggcattggcggcatg
attcgcgcgcaggtactcagctttcaccgcttggcttggcgcgtcatgcaggaagagggc
ggaacagcgagacagccgatcgacgatacagggaaacaaatgctgctcacaagcatttta
catacttacaagcaccagcttcgcgtattcggacacgcctcggagcagctaggctttgtg
gatcggctaaatcagttgtttacagagttaaaaagataccgcgtctcggcggatcagctc
gaagcatttgagaaaagcaatgtgcaggctatcggcggcagcggtctgctgacggataag
ctccatgatattcgcctagtcttccgtgtgtttgaatcggagctgtccaagcagtatctg
gatggagaggattacttgacgctgttggcagagcaaacggcccattcggcttatttgcga
agcgcagacgtatggatcgacggcttccatggttttacaccgcaagagcttgcggtcgtc
ggacaattgtttgctgtctgcaagtccgttacgatcacgctatgtctggatcgccctttg
gaggctgaggatcaacccgatgagcttgatctgtttcatccgaccgcgacgacgatggtt
cggctgcagcaattgatctggcagcttgggatcggtcctgcggaagtcgtcttgttacag
ccagaaacgtttccgcggttccaagagagtcctgcactcgctcatttggaagcttcatac
gataagcggatcggcggagcagacagcaagtttgtgtccgaagaaggtgttcaactggaa
gggcagctggtcatcaaggaagcagtcaaccgaagagccgaagtggagggcgctgtaagg
gatattcttcatctcgtcagggagaagcatgtccgttaccgcgatattgccattatggtc
cgtaacatggagggctatagcgatttgctcaaagcggtcctgaccgattatgggataccg
cacttttttgatcagaaaagaacggttctgcatcatcccctcattgaatttattcgatcg
gcgctcgagatcgttcagcacaactggcactatgacgccgtgttccgctgtgtcaaaaca
gatcttcttctgccgggtgacgatattacccttagggaacgaatggataagctggagaat
tatgtcctggcgtttggcattcagggctaccggtggacagacggcaaaccgtgggcttac
aggcatcgcatgaatctggaacagcctgacctagctgaggatgctgcggtttcctcagag
cttgagcgcctgaatgaggcgaggatgtgggtggtaacacctttgcatacgtttgctggg
cggctcaaaaaggccaaaaacgtgcagcagcaggtagaagcattgtatggattgctgatg
gatgtagaggccccgaacaagctcgatgcatggagtcttcgggagcttcagtcaggccat
ccggagaaagcgcgcgagcatgggcaaatgtggaacagtgtcatggatatgcttgaccag
ctcgtcgagacgatgacagacgattccgtatcgacggagctgtttgctgcactgattgag
acaggcgccgagagcatgaagcttgggttggtgccgccttccatggatcaggtgcttatc
ggcagcatggaccgtaccagatcgagtggtattcgctatgcgtacgtacttggtgtcaac
gatggagtcattccggcacagatggatgaaaaaggggtacttacggagtcggagcgggaa
tcgctcctgatgtccggtttgccaatggcagacggcagtacgagaaagctgctggacgaa
cagttcatcgtgtatacatccttgactgttccatccaatcgactgtggctcagctacccg
ctcgcagatgaagagggcaaatccctgctgccgtccgagctgattaagcagctgcgtcgt
ttatttccgcaagttcgcgagcagttgcttctggccgagccatctcccgattctaatgaa
gcggagcagttggaatacctggcacatccgaaccaggcactttcctatttggcagtgcgc
atgaagcaatggatgcaaggcgggacgatgccagagctatggtgggacgtctacaattgg
tatgccgtcaagccagaatggctgaacaagatgaacgcgctcatccaggcgataacttat
acgaacaaagagcatagcttatctggccatactagccatcttttgtacggcaagcattta
agggcgagtgtgtcacggatggagaaatacgttgcttgtccgtttgcgcacttcttatcc
cacgggctgagacttcaggaaagacgagtgttccgtctggatgctcccgatatcgggcag
ctgtttcatgctgcattgaatcaatttgtgcaaaagcttcagcaggatcagctggattgg
ggagcgctcacggcagaggaatgcatggaaaggtcttcacaggttgtagatgagcttgcc
ccgagattgcaaggagaaattttgctcagttcaagccgatatgcctacattgcgcggaaa
ctgaagcaaatcgttggcagagccgcagcagtgctgggtgagcatgcaaggcacggccaa
tttgaaccgctcggattggagattgattttggaccgggcaaagaactgccaccgctaacg
tttcagctggagaacggctgtacgatggaaatcatcggacggattgaccgtgtagaccga
gcggatggtgaacaaggtgtcctgctgcgcgtgatcgactacaaatcaagccagacctca
ttgcatctgtccgaagtgtattacggcctttctcttcagatgctgacgtatctggatgtc
atccttacacacgccgagcagtggctgggtatcgaagctaagcccgccggtgtactttat
tttcacgttcataatccgatgctgcagcaaaagaatgccatagatcccgctgaggtggac
aaggagcttcgcaaacgttttaagatgaaaggattggttacggccgacgcagacgttgcg
ggacttatggatggtcaactcattgatgcaccaggccattcgcagctgattccggtcgca
ttgaaaaaagatggaagcttctatacgaattcgtcggtggctacggatgcccagtgggac
attcttcgcaactatgtgcgcaaacaggtgcgccgcattgggactgatattacgaatggt
cacgtagatattgcgccgttccgattaggcaagaagaccgcttgcatgcactgctcgtat
cgatcggtatgccaatacgatcctttatttgaaggcaatgaacagcaggtatggaaacag
cggcctaaagatcaagtgtggtccgaaatggagcagcatacggcaccgaaataa
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