Paenibacillus hexagrammi: L0M14_09910
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Entry
L0M14_09910 CDS
T10205
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phex Paenibacillus hexagrammi
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phex03016
]
L0M14_09910 (truB)
Enzymes [BR:
phex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L0M14_09910 (truB)
Transfer RNA biogenesis [BR:
phex03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L0M14_09910 (truB)
Prokaryotic type
L0M14_09910 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TR61B_FKBP-like
BRD4_CDT
Phasin
Motif
Other DBs
NCBI-ProteinID:
UJF35383
LinkDB
All DBs
Position
2252391..2253305
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AA seq
304 aa
AA seq
DB search
MMYEGVLPVWKPEGYTSHDVVAKARRILGMKRIGHTGTLDPQVTGVLPLCLGRATRMVEF
IQELPKEYEAVLVIGLSTDTEDMTGTVTEQAENVRLDEDQVLQTIGTFIGEIDQVPPMYS
AVKVEGKRLYELAREGKEVERKSRKVTIHEIDVLTMNMQSDKPEIHLRVRCSKGTYIRTL
CVDIGKALGYPSVMKSLIRTSTGNIRREQCVTLEQMAQLKEEGTLQSKLIPMDQSIGHLP
AVRLTARESEHALQGKRISVQPERVLEGAASETLLRAYSPEERFLGLFEWHSSTQCLVPS
KVFV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgaaggtgttttacctgtttggaagccggaaggctatacttcccatgatgtt
gtagccaaagctagacgaattttaggtatgaaacggatcggccatacgggtacgctggac
ccccaggttaccggcgtactgccattatgtttaggacgagctacccgcatggtggagttt
attcaagagctccctaaagagtatgaagctgtgctagtgattggtctttctaccgatacg
gaagatatgacagggaccgttacggaacaagctgagaatgttcgacttgatgaagatcaa
gttctgcaaactatcggtacattcatcggtgagattgatcaagtgccccctatgtattcg
gctgtcaaggtggaaggaaaacgtctttacgagctggcgcgggaaggtaaggaagtagag
cgtaaatctcgtaaagtgaccattcatgagattgacgtattgacaatgaatatgcaaagc
gacaagccggagattcatcttcgtgttcgctgctccaagggtacctacatccggacatta
tgtgtagatatcggcaaagcattaggatatccctctgttatgaaaagcttaattcgaact
tcaacgggaaatattcgtagggagcaatgcgttacactcgaacagatggcacaattgaag
gaagaaggcactcttcagagcaagcttatccctatggatcaatctattggacatctgcct
gctgtgcggcttactgccagagaatcggagcatgctctgcaagggaagcggatctctgtg
caaccggaacgagtattggaaggtgctgcctctgagacgctgcttcgagcatactctcct
gaagagcggtttttaggtttgtttgaatggcattccagcacgcagtgccttgttccttcc
aaagtgtttgtatag
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