Paenibacillus hexagrammi: L0M14_10040
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Entry
L0M14_10040 CDS
T10205
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
phex Paenibacillus hexagrammi
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phex03009
]
L0M14_10040 (rimO)
Enzymes [BR:
phex01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L0M14_10040 (rimO)
Ribosome biogenesis [BR:
phex03009
]
Prokaryotic type
ribosomal protein modification factors
L0M14_10040 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UJF35405
LinkDB
All DBs
Position
2278812..2280140
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AA seq
442 aa
AA seq
DB search
MTEKVKVVTLGCEKNLVDSEIMSGLIHGRGFQLVDNKEDATVIIVNTCGFIDAAKEESVN
TILDMAELKQTANLKALIVSGCLTQRYKKELMEEMPEIDGIVGTGDFDKINHIVDEALRG
RKPVLVGNPVFNYDADLPRQVTTPRYTAYVKIAEGCDNACTFCSIPIMRGKFRSRSMESI
VAEVTQLAAQGVKEISLIAQDSTNYGTDLYDGFKLPALLNKVSEVPGIEWVRLHYAYPGF
FTDELIDTIAANPKVCKYIDMPLQHSEDSILKRMRRPGRQKDARELVRKIRERIPQVSLR
TSLIVGFPGETEEDFENLKQFVKDMQFDRLGVFAYSKEEDTPASRLPDQVPDEVKEYRAN
TLMEIQREISNIRGGRRIGQELDVLIERYDGRSDVYVGRSQYDAPEIDGEVFVSNAKLNI
GELAKVRITHSFEFDLSGEVIA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaagtaaaagtagtaacactcggctgcgagaagaatttggtcgactccgag
attatgtctggattaattcatggccgcgggtttcagctcgtagataacaaagaggatgcc
acggtcatcatcgtcaatacatgcggctttattgatgcggccaaagaagagtcggtaaat
acgattctggatatggctgaattaaaacaaacagcaaacctgaaggcgctgattgtgtcg
ggatgcttgacacagcgttacaaaaaagaattgatggaagaaatgccagagattgatggt
attgtagggactggggatttcgataagatcaaccacattgtggatgaagcgcttcgcggc
aggaagccggttctagtgggcaatcctgtatttaactatgatgcggatctccctagacag
gtgaccactccacgttacacggcatacgtcaagattgctgaaggctgcgataatgcatgt
accttctgcagtattccgatcatgcgcggcaagttccgaagcagaagtatggagtcaatc
gttgcagaagtaactcaattggctgcccaaggcgttaaggagatcagcctcatcgcacag
gattccacgaactacggaacagatctttatgatggcttcaaacttcctgcgctattgaac
aaggtcagcgaagtgccgggtattgagtgggtgcgattgcattatgcctaccccggattt
ttcactgatgaactgatcgatacgattgctgccaatcctaaggtgtgcaaatacatagac
atgccgctgcagcacagtgaagattcaatcctgaaacggatgcgcagaccgggtcgtcag
aaggatgcacgtgaactcgttcggaaaattcgtgagcgtattccgcaggtgtcgcttcga
acgtctttgatcgttggttttcctggtgaaacagaagaagattttgaaaatttgaaacaa
ttcgtgaaagacatgcagtttgaccgtttgggcgtattcgcatactcgaaagaagaggat
actccggcatcgcgtttacctgatcaagttcctgatgaagtaaaagagtaccgtgccaat
acactcatggaaattcaacgcgaaatctcgaatatccgtggcggccgccggatcggtcaa
gagctggatgtgctcattgaacgttatgacggcagaagcgatgtatatgtagggcgctca
cagtatgatgctcccgaaattgacggggaagtgtttgtctccaatgcgaaactaaatatt
ggggagcttgccaaggtacgcatcactcattcctttgagtttgatttgtccggggaggtc
attgcatga
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