Paenibacillus hexagrammi: L0M14_12905
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Entry
L0M14_12905 CDS
T10205
Name
(GenBank) ATP-binding domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phex Paenibacillus hexagrammi
Pathway
phex03420
Nucleotide excision repair
phex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L0M14_12905
03430 Mismatch repair
L0M14_12905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phex03400
]
L0M14_12905
Enzymes [BR:
phex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L0M14_12905
DNA repair and recombination proteins [BR:
phex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L0M14_12905
MMR (mismatch excision repair)
Other MMR factors
L0M14_12905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
AAA_19
UvrD-helicase
AAA_30
Viral_helicase1
SLFN-g3_helicase
PhoH
AAA_12
DEAD
nSTAND3
ResIII
NACHT
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
UJF35895
LinkDB
All DBs
Position
2893444..2895606
Genome browser
AA seq
720 aa
AA seq
DB search
MDTKTQSAYQDELQQLEATSQEIDRQLALLHATPVYYGPDVTEQALEGIREQARHNLSKA
VEEPYFGRMDFQENGTEQAAPLYIGKAGVEDPQTGKLLVIDWRAPVASLFYSFTGGLDPA
SYESPDGIIEGLVYLKRNLVIRKQILQRVVDTYDRSQDSLAVGDEFLLYRLGENKDSKLR
DIVSTIQAEQDRIIRAAKNTALIIQGVAGSGKTTVALHRLAFLLYQYREQIRAERMIIFA
PNSMFLDYISGVLPELGVGSIQQSTFTDWVLDILDQEVKVVDPSLALQTWFATSGKRPVI
DEHTPGRYKGSIRFQQYLDDCLTRFETTYVPASDFIPWEGAKLPIAKIREWFFVENKHYP
LVKRRERVVARIKRWMDMQLERIWETSRKKELKKKGAQKLRSYLTAWPEHTAFSLYKLLY
SETGRPESLPIELLHQLPETLVAQAAKQFKKKEVQHEDLAPLLYIHSRLHGIPSDRMFDH
VVIDEAQDFSPFQVAVLNSYTRNRSFTILGDLSQGIHAYQGIMDWKEFSDLFEDNETGYF
ELERSYRSTMEIIHFANQVLTRGVENPLLAVPVFRSGDKVRVLQTKASERLPLMVQSVRH
LQQGSAATIAVVARTEKQALQLHEALTEAGVEANLITAKQREYRGGISVVPIYLTKGLEF
DAVLLMDVTASHYEVNLTDAKLLYVGCTRALHELWLLAAGDLSPLVLTDDSEIVSTESPF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
ttggacacaaagactcaaagtgcctatcaagacgaattgcagcagcttgaagctaccagc
caagaaatcgaccggcagcttgccctattacacgctactccggtttattacggacccgat
gtaaccgagcaagccctggaaggcattcgcgagcaggcgaggcataacttgtccaaagcc
gtggaagagccttattttggacgaatggattttcaggaaaacggcactgagcaggccgct
cccctctacatcggcaaagccggtgtagaagacccgcaaacaggcaagctgctcgtcatt
gattggcgcgctcccgttgcgagcttgttttattcgtttaccggcggtctggatccggct
tcctacgaatctcccgacggaatcatcgaagggcttgtttatttaaaaagaaaccttgtg
attcgcaagcaaattctgcagcgggttgtagatacttatgaccgcagccaagattcactt
gctgtaggagacgaatttttgctataccgtcttggtgaaaacaaagacagtaagcttcga
gatattgtatctacaattcaagcggagcaagaccggattattcgtgcggctaagaataca
gcgctcatcattcaaggagttgcaggcagcgggaaaacaacggtagcgctccatcgcctc
gccttcctgttgtatcaataccgcgaacagattcgcgcggaacgaatgattatttttgca
cccaacagtatgtttctcgattacatctcgggcgtattgccggaacttggagtcggcagc
atccaacaaagcacgtttacggattgggtactcgacattttggatcaggaagtcaaagta
gtcgatccgtccctcgctttgcaaacctggtttgctaccagcggcaagcggcctgtgatc
gatgaacacacccctggacgatacaaagggtcgatccgctttcagcagtatttggatgat
tgtctcacccgctttgagacgacatacgttcccgcttcggatttcatcccttgggaaggc
gccaagctgccaatcgccaaaatccgcgaatggttctttgtagagaataaacattatcct
cttgtcaagcgccgcgaacgtgttgtcgccagaatcaaacgatggatggacatgcagctg
gagagaatttgggaaacaagccgcaagaaagaattaaagaaaaagggagctcagaagctc
cgcagctacttgaccgcatggcccgagcatactgccttttcgctctataaacttctctac
tctgagacaggtagaccggagagcttgccgatcgaacttttacatcagcttcccgagact
ttggttgcgcaggcagccaagcagttcaaaaagaaagaagtgcagcacgaagatttggct
ccgctcttgtacatccactcccgtctgcacggtatcccttcggaccgcatgttcgatcat
gtcgtcattgatgaggcgcaggatttctcgccgtttcaagtggcggtcctgaactcctat
acacgtaaccggtcgttcacgatcctgggagacctgtcacaaggaattcatgcgtatcag
ggaatcatggattggaaggaattctcggatttatttgaggataacgaaacgggctatttc
gaactggagcgaagctaccgttctacgatggaaatcatccattttgccaaccaggtgctc
acacgcggtgtcgagaatcccttactggccgtacccgtattccgcagcggagataaagtt
cgggttctacagacgaaagcatcggaacgtctgccgcttatggtccagtcggttcgccac
cttcagcaaggctccgcggcaaccattgcagttgtggcacggaccgagaaacaggcgtta
caactgcatgaagcacttacagaagccggagttgaagccaacctcattactgccaagcag
cgggagtaccgtggtggcatctctgtagtaccgatctatctgaccaaagggctagagttt
gatgcggtactgttgatggacgtcacagcctcccattacgaggtaaatctgacggacgcc
aagctgctctatgtcgggtgtacacgcgcacttcatgagctttggctgctggctgcggga
gatctgtctccgcttgtgctcaccgatgacagcgagattgtttctacggaatcaccgttt
tag
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integrated database retrieval system
