Paenibacillus hexagrammi: L0M14_13295
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Entry
L0M14_13295 CDS
T10205
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
phex Paenibacillus hexagrammi
Pathway
phex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L0M14_13295 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phex03400
]
L0M14_13295 (mutM)
Enzymes [BR:
phex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
L0M14_13295 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L0M14_13295 (mutM)
DNA repair and recombination proteins [BR:
phex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L0M14_13295 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Ribosomal_S13
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
UJF35965
LinkDB
All DBs
Position
complement(2971459..2972274)
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AA seq
271 aa
AA seq
DB search
MPELPEMENYRRLLSQLIVGKPITHVTVNRSKSINMPDSEFIYRIVNHRLTQIARRAKHL
LFQLDTGETLVLHLMLGGWMHLGSDADKPDRNTQVEFEFNRSEKLYFIGLRLGYLHVYTP
SELQEALGDLGPEPLSPEFTLQRFQEMVAQKKGVLKSQLVNQQWIAGIGNCYSDEICYDA
GVKPIRKISELTEQEIRQLYASIHHVLTNAIRIGGYMEDPLYVGDTLTGTYNHHCLVYDR
GGESCFRCGGTIVLDRSVASRKTFYCPDCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgccggaaatggagaattatagacggctattatctcagttgattgtaggt
aagcccattactcatgttacagtgaatcgaagcaagtcgatcaatatgccggattccgag
tttatttatcggattgtcaatcatcgtctgacacagattgcacgcagagccaagcatttg
ctgtttcaattggacacaggcgaaacgctagtgcttcatctgatgctggggggatggatg
cacctaggctcagatgcggacaagccggatcgaaatacgcaggtagagttcgagtttaat
cgctcggagaagctttattttatcgggctgcggcttggttatttgcatgtatacacgcca
agcgagctgcaggaagccttgggtgatttggggccggagcccttatcgccagaatttact
ctgcagcgatttcaagagatggtcgctcaaaagaaaggtgtgctgaagtcacagctcgtt
aatcaacaatggattgcggggataggcaattgctattccgatgaaatctgctatgatgcc
ggtgtgaagccgatccgaaagattagtgagctgactgagcaggagatcaggcagctgtat
gcttccattcatcacgtgctaacgaacgccattcgaattgggggctatatggaagatccg
ctctatgtgggagatacgttaaccggtacctataaccaccattgtctcgtatatgacaga
ggtggcgaaagctgttttcgatgcggcggaaccattgtactggaccggtcggttgcatca
cgaaaaacgttctattgtccagactgtcaacggtaa
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