Paenibacillus hexagrammi: L0M14_14715
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Entry
L0M14_14715 CDS
T10205
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
phex Paenibacillus hexagrammi
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phex03032
]
L0M14_14715
03036 Chromosome and associated proteins [BR:
phex03036
]
L0M14_14715
03400 DNA repair and recombination proteins [BR:
phex03400
]
L0M14_14715
DNA replication proteins [BR:
phex03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L0M14_14715
Chromosome and associated proteins [BR:
phex03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
L0M14_14715
DNA repair and recombination proteins [BR:
phex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
L0M14_14715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_euk_1
Rpf1_C
HU-DNA_bdg
Peptidase_C80
Glycos_trans_3N
RsbRD_N
Motif
Other DBs
NCBI-ProteinID:
UJF36194
LinkDB
All DBs
Position
complement(3270612..3270884)
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AA seq
90 aa
AA seq
DB search
MNKSELINKVAETSELSKKDATKAVDAVFDAISEALQSGDKVQLVGFGNFEVRERSARKG
RNPQTGDEIEIPASKIPAFKPGKALRDGIQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctgaattgatcaataaggttgctgaaacttccgaactttccaagaaagac
gctacgaaagcagttgatgctgtttttgatgcaatttccgaagctctgcaaagcggagat
aaagtacagcttgttggattcggtaattttgaagttcgtgaacgttccgctcgtaaggga
cgcaatccacaaacgggtgatgaaatcgaaatcccggcaagcaaaattccagcattcaaa
ccgggtaaagcgcttagagacggaattcaataa
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