Paenibacillus hexagrammi: L0M14_17220
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Entry
L0M14_17220 CDS
T10205
Name
(GenBank) cohesin domain-containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
phex Paenibacillus hexagrammi
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
L0M14_17220
Enzymes [BR:
phex01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
L0M14_17220
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
Cohesin
AGA-YXIM_GBD
Rhamnogal_lyase
CarboxypepD_reg
Dockerin_1
EMC7_beta-sandw
RhgB_N
EF-hand_7
Big_11
Motif
Other DBs
NCBI-ProteinID:
UJF31547
LinkDB
All DBs
Position
complement(3772762..3775791)
Genome browser
AA seq
1009 aa
AA seq
DB search
MKRKQSSISIMIMVAVMFTLILGSFNPKSAFAAEQQFPLKFDFGTSSSVVADGYIGVGPS
LIYTAEKGYGLNQAIDSRDRSTNSNSLLRDFVISSQSYTFQVDLPNDVYNVKVIAGDDIA
SNRTAVTAEGIDLGSTSTPKGQFAELNASVPVTEGKMVFTITGNDGRLNGIEISRSGDGD
NTPPQDVTLVDNGSTVTLKNSKISFDVNKTTANISSIFFTDSKNPYFNLVGGQNGRGYYL
ANYSVDGTSYQKGISGADFKVVSQTPERAEISMTVNDPSTLQFYLEVHMVLEKDSPGFYY
YTVYKYPDTMPDGLSIGQLRYAFALGDPSFTYFAVDDQRGIQQRPTIDDLSNDTTLQDTT
YLLPGADLPEGRIYSKYQNISNMEGDNHVFMASNGKVGVSIIQASKEYVDGGPTKQDLTV
HDYYNGEILLWHEHTGHYGTPAIEPAKGWEKVYGPFYLYVNEGSGSDASVANVQEMWEDA
KAKASEEQAKWPYTWITDPTYAASSRSDVSGKLEISDGSSANEAHVILSRPGIDWQLDTE
SYTYSARAGADGKFTIPAVRPGTYTLTAFVDGVMGEYKQENITVGSATPLDLGTIRWTPA
KYGDLVWQIGTPDRSAEEFHVYGGEEGFRKHLTWLEYPYEFPNGVDFKIGESDPKTDWNY
FQPMFKTPGTPTQLDLRGTTEDQSLTEWKIRFDSDGYQEGTATLNIALASSVFGSLDVKL
NGTPVGSFETLPGPPGDNALYRLAVRSVYRQLDPIQFDANLIHEGENIITLSPHQTPTAP
TSDDWMNPMASIMYDAIRLEVADDAAPAGPISAVLNASDQVTGGAEFEVAYGLESVTDSV
YAQDLTFTYDPSAVEFDSAESVKEGLQIISKKEASGQVRLLLASLGSENAVQSAGDLVKL
KFKAKSDAASASTVITLTQAVISNGNGDETELAAAAKSIAIIPVNPSIPGDMNGEGHVTV
GDLAIVASGYGKTSSDADWATYKAADLSGDGKIGIEDLAQIARLILGME
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaaacaaagctcaatatccatcatgataatggtggccgttatgttcactctt
attctaggcagcttcaatcccaaatcagcgtttgctgccgagcagcaatttcctctaaaa
tttgatttcggcacgtcatcaagtgtggtggccgacggctatataggagttgggccttca
ctgatctacacggcggagaaaggctacgggctaaaccaagcgatcgactctcgcgatcgt
tcgaccaattcgaattctctgctgagagattttgtgatctcaagccaatcctataccttt
caggttgatctgccaaatgatgtatataatgtgaaggtaatcgcaggagacgacattgcg
tcgaacagaacggcagttactgcagaaggtattgatcttgggtcgacaagcacgccaaaa
ggacagttcgcagaactgaacgcttccgttcctgttacggaaggcaagatggtgttcacg
atcactgggaacgacggacgtctgaacggtattgagatcagcaggtcgggggacggagac
aacacacctccgcaagatgttacactcgtcgataacggcagcaccgttacgctgaagaac
tccaaaatttccttcgatgtcaataaaacaacggcaaatatatcatcgatcttttttacc
gacagtaaaaatccttatttcaacttagtaggaggccaaaacggcagaggctattatctg
gccaattatagtgttgacggcacatcctatcagaaaggcatatcgggagccgacttcaag
gtggtctctcaaacgcctgaacgcgcagagatttccatgacggtcaatgatccgagcacc
cttcaattctacctggaagttcatatggtgctggagaaagactcaccgggcttctattat
tacacggtttataagtatcccgatacgatgcctgacggcttaagcatcggtcaattaaga
tatgcttttgcgctcggcgatccttcctttacttactttgccgtggacgatcagcgcggt
attcagcaaagaccgaccattgacgatttgagcaacgatactacgcttcaagatactacg
tatctgctgccaggcgccgacttgcctgagggcagaatctattcaaaatatcagaatatc
tcgaatatggaaggcgacaatcatgtgtttatggcttccaacggcaaggtcggcgtatcc
atcattcaagcgagtaaggaatatgtggacggcggaccaaccaagcaggatttaacggtt
catgattactataacggggaaattctgctgtggcatgagcataccggccattacggaact
cctgcaatcgagcctgcgaaaggctgggaaaaggtctatggccccttctacttgtatgta
aatgaaggctccggttcggatgcatctgttgccaatgtgcaggagatgtgggaggacgcc
aaagcgaaagcaagcgaggagcaagccaaatggccgtatacctggattaccgatccgacc
tatgcggcgtccagccgatctgatgtgagcggaaagctggaaatttccgacggctcctcc
gcaaacgaggcacatgtcattctatcgcgtcctggcatagattggcagctggatacagaa
agctatacatattcggctcgcgccggtgctgacggtaaatttacgattcctgccgtacgt
ccgggcacctatacgctgacggcctttgtagatggcgtaatgggagaatataaacaagaa
aatatcacggtgggaagcgccactccgcttgatcttggtacgataagatggacacctgca
aaatatggagacctggtctggcagatcggtacaccggaccgctcagccgaggaattccat
gtatacggcggagaagagggctttagaaagcatttgacctggctggagtatccgtatgaa
ttcccgaatggtgttgactttaaaatcggagaaagcgatccgaaaacagactggaactac
ttccagccgatgtttaagacaccaggcaccccaactcagctggatctgcgaggcacaacg
gaagaccagtcgctaaccgaatggaaaatccgctttgattcggatggatatcaggaaggt
accgcaaccttgaatattgcccttgcaagctctgtattcggttctctcgatgtaaagctg
aacggtacccccgtcgggagctttgaaacactgccggggccccctggagacaacgcctta
taccgattggctgttcgcagtgtgtaccgacaattggatcccattcaatttgatgcaaat
ctgattcatgagggagagaacatcataacgctctcgccgcatcaaactcctactgccccg
acctccgacgattggatgaaccctatggccagcatcatgtatgatgccattcggttagag
gtagcggatgatgcggctccagcaggcccaatcagcgcagtactgaacgcctcggatcaa
gttaccggcggtgcggaattcgaagttgcttatggtctagagagtgtcacagatagcgtc
tatgctcaagatctgaccttcacttatgatccgtccgcagttgaatttgactcagcggaa
tccgtcaaggaaggacttcagatcatcagcaagaaggaagcttccggtcaggtgcggcta
ctgctcgcaagcttgggctcggagaatgctgtgcaatcagcaggagatctcgtgaagctg
aaattcaaagcaaagtcagatgccgcttcagccagcactgtcattactttaactcaagca
gttatttctaacggaaacggcgatgaaacggaacttgcagctgctgcgaaatcgatcgcg
atcatacctgttaatccttcgataccgggagatatgaacggagaaggtcatgtaaccgtt
ggggatctggctatcgtggcaagcggctacggcaaaaccagcagcgatgcggactgggct
acctacaaagcagcggacctgagtggcgatggtaagattggaattgaagatctggctcaa
atcgcacgattgattctagggatggaatag
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