Paenibacillus hexagrammi: L0M14_18180
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Entry
L0M14_18180 CDS
T10205
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
phex Paenibacillus hexagrammi
Pathway
phex03030
DNA replication
phex03410
Base excision repair
phex03420
Nucleotide excision repair
phex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0M14_18180 (polA)
03410 Base excision repair
L0M14_18180 (polA)
03420 Nucleotide excision repair
L0M14_18180 (polA)
03440 Homologous recombination
L0M14_18180 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phex03032
]
L0M14_18180 (polA)
03400 DNA repair and recombination proteins [BR:
phex03400
]
L0M14_18180 (polA)
Enzymes [BR:
phex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0M14_18180 (polA)
DNA replication proteins [BR:
phex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L0M14_18180 (polA)
DNA repair and recombination proteins [BR:
phex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L0M14_18180 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L0M14_18180 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UJF31702
UniProt:
A0ABY3SCH0
LinkDB
All DBs
Position
complement(3963521..3966172)
Genome browser
AA seq
883 aa
AA seq
DB search
MDKLVIIDGNSIASRAFYALPLLSNSSGLHTNAVYGFTTMLLKLIEEEKPTHFLVAFDAG
KVTFRHKEYTEYKGGRAKTPPELSEQFPLIKELLKAFQIPQFELQGYEADDIIGTLTRVA
DESGKQVLLVSGDKDMLQLSSDQVTVAITRKGITEVERYNPAEIMEKYGLEPKQIVDLKG
LMGDTSDNIPGIPGVGEKTALKLLHEYGSVEEVLAHAAEMKGKMKEKIEEHAKDAMMSKE
LATIFREVPMDTDWATFRYEGYDGQALSSMFRKLEFKTLLEKMDFSGGEADIESAVSLDI
EVISEAGISGLAHALGDSTSLHIEIVGENPHHSEVAGVAFYLADGDKYAYVPFELLMSEA
GQPIQDWLSDESKKKQLFDQHRAELALAWHGVRLRGVDFDVLLAAYLLDPTESTLTVSGL
AFKYGLPGIRPDEDVFGKGAKFRLPELAALSEHLCRKADTIRRAVPVLREELEKGEMHRL
FYELELPLAGVLAEMELRGIKVDAAGLRQLGDEIAGQLEGIMARIYQLAGCEFNINSPKQ
LGEILFEKLGLPASKKTKTGYSTDAEVLERLAPYSEIVGQILQYRQLAKLQSTYIEGLLK
EVRPETGKVHTYYRQTIAATGRLSSQYPNLQNIPIRLEEGRKIRKVFVPSEPGWYILAAD
YSQIELRVLAHISQDEKLKEAFLQNMDIHTKTAMDVFGVQESEVDSNMRRSAKAVNFGIV
YGISDYGLSQNLAITRKEAASFIEQYFAVFQGVRTYMDDIVKDARRDGYVTTLLQRRRYL
PEITASNFNLRSFAERTAMNSPIQGSAADIIKLAMVQMAERLKADGLKSRMLLQVHDELV
FEVPEEELELMKRIVPEVMADALKLDVPLQADVDYGLTWYDAK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggataaattagttattattgacggcaacagcatcgcgagcagagcgttctatgcgctg
ccgctgctcagcaactccagcggactgcacacaaatgccgtatacggctttacgacgatg
ctgctgaagctcattgaagaggagaaaccgacccattttctcgtcgctttcgacgctgga
aaagttacgttcagacataaagaatataccgaatataagggcggaagagcaaagactcca
ccagagctttccgagcaatttccgctgattaaagagctgctcaaagcgttccagattcct
cagtttgagctgcagggctatgaggcggatgacattatcgggacactgacgagagtagct
gatgagagcgggaagcaggtgctgcttgtctctggagataaggatatgcttcagctgtca
tccgatcaggtcaccgttgcgattacgcgcaagggcatcacggaagtagagcgttataac
cctgcggaaattatggagaagtacggactggagcccaagcagatcgtagacttgaaggga
cttatgggtgatacgtccgataatattccgggtattcccggagtcggcgagaagacagcg
cttaagctgcttcatgaatacggttccgtggaggaagtattggcgcatgctgccgagatg
aaaggcaagatgaaggagaagatcgaggagcacgccaaggatgcgatgatgagcaaggaa
ctcgccacgattttccgtgaagtgccgatggatacggattgggcgactttccgttatgaa
ggctatgacggacaagctttatcgagcatgttccgtaagctggaattcaagacactgctg
gaaaaaatggatttctccggaggggaagccgatatcgagtcagcagttagcctcgatatc
gaggtaatctcggaagccggaatctccgggctggctcatgcgcttggcgactcaacctca
ctgcatatcgagattgttggggagaatccccaccactcggaggttgccggagtggcattt
tatttggcggacggggataagtacgcctatgtgccgtttgagcttctgatgagcgaagcc
ggacagccgatccaggattggctgtctgacgagtcgaagaagaagcagctgttcgaccag
caccgcgcggagctggcgctggcttggcatggcgtccgcctgcgcggcgtggacttcgat
gtgctgctggccgcttatctgctcgatccgacggagtcgacgctcacggtcagcggcctg
gccttcaagtacgggctgccgggcatccggcccgacgaggatgtattcggcaagggcgcg
aagttccgcttgccggagcttgccgcgcttagcgagcacctgtgccgcaaagcggatacg
atccgccgcgcagtgcccgtgctgcgcgaggagctcgagaagggcgagatgcatcgcctc
ttctacgagctagagctgccgctcgccggcgtgctcgcggagatggagctgcgcggcatc
aaggtggatgccgcggggctgcggcagctcggcgacgagatcgccgggcagctcgagggc
atcatggcccgcatctaccagctcgcgggctgcgagttcaacatcaactcgccgaagcag
ctcggcgagattctgttcgagaagctgggtctgccagcttcgaagaagaccaagaccggc
tactcgacggacgccgaggtgctggagagactggcgccctactccgagatcgtagggcag
atcctgcagtaccggcaactggccaagctgcagtcgacctacatcgaagggctgctgaaa
gaggtgcggccggagaccggcaaggtgcacacctattaccggcagacgattgccgctaca
ggccgtctcagcagccaatacccgaacctccagaatattccgatccgtctggaggaaggc
cgcaagatccgcaaggtcttcgtcccatccgagcccggatggtacatcctcgccgcggat
tactcgcagatcgagcttcgcgtactggcgcacatctcgcaggatgagaagctgaaggaa
gcgttccttcagaacatggacatccacacgaagacggcgatggacgtcttcggcgtacaa
gagagcgaagtcgactcgaacatgcgccgttcggcgaaggcggtcaacttcggtatcgta
tacggcataagcgactacggtttgtcgcagaatctggctattacccgtaaagaagcggcc
agctttatcgagcagtattttgccgtcttccaaggggttcgcacctatatggacgacatt
gtcaaggacgctcgccgagacggctatgtgacgacgctgctgcagcgccgccgctatttg
ccggagatcacggcttcgaactttaacctgcgttcctttgccgaacgcacggcgatgaat
tcgccgattcaaggctcggccgcagatattattaagttggctatggtgcagatggctgaa
cgcttaaaggccgatggtctgaaaagccgcatgctgcttcaggtgcatgacgaactggtc
ttcgaggtgccggaagaagaattggagttaatgaagcgtattgtgccggaagtaatggct
gacgcgcttaagctggacgttccgctgcaggcggacgtagactatggattgacctggtat
gacgccaagtaa
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