Paenibacillus hexagrammi: L0M14_24825
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Entry
L0M14_24825 CDS
T10205
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phex Paenibacillus hexagrammi
Pathway
phex03420
Nucleotide excision repair
phex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L0M14_24825
03430 Mismatch repair
L0M14_24825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phex03400
]
L0M14_24825
Enzymes [BR:
phex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L0M14_24825
DNA repair and recombination proteins [BR:
phex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L0M14_24825
MMR (mismatch excision repair)
Other MMR factors
L0M14_24825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
PhoH
SLFN-g3_helicase
AAA_30
DEAD
NACHT
nSTAND3
ResIII
AAA_16
DUF6779
Motif
Other DBs
NCBI-ProteinID:
UJF32775
LinkDB
All DBs
Position
complement(5462072..5464300)
Genome browser
AA seq
742 aa
AA seq
DB search
MNKTEQEEQVPHDQDWAAEQARVTDVTSQIRTKIQQLEDEVGEVRAEVVDIRKNFWDHVT
VDFSTVDDAIESHASLKQQSEILFHREQRHRHAAVTLGKLRRLERSPYFGRIDFVEQGEQ
ITEKIYLGIASFLDEAGLSYLVYDWRAPISSLYYDYAPGQAAYETPNGAIAGEMLLKRQF
IIRDGVMELMFDTGVTIGDELLKRALSRSSDAQMKSIVATIQKEQNRIIRNDHSRMLIVQ
GAAGSGKTSAALQRVAYLLYKHRDTLQADQMVLFSPNPLFNSYVSTVLPELGEENMQQTT
YQAYLEHRLGSMFDIEDPFTQLEYVLGGAGVDGDIAVKAELECAHASEGAILLESCKGSE
ISEAASLSQANGNLGAIVSEALGDNRAAEKAGGHALSGAHREPSESKRDGTTIRDSAGID
YVSRISGIRFKSSAEFLYMIQGYKQHLEASGMKFNPITFRGKIVIDVNQMAEHFYSYEKG
IRVPNRLELMQKWLLDRLKKFSAAEIHAPWVDEAIELLDADDYHRAYQRLRKMKGGEGIT
FDDFEKERGMLAKIVVKDQLKPLREDVKQLAFVDMTGLYLQLFKNPQLAQDLSAGAELPA
HWEGIASQTERTLMQGSMLYEDATPYLYLMETVKGFHTNTSVRHVIVDEAQDYSPFQLEY
LKRLFPRSRMTALGDLNQAIYSHASAYSDIDPLAALYGPDQTEIIRLTRSYRSTREIVEF
TRGIVPGGDAIEPSTAAARSRC
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaccgagcaagaagagcaggtgccgcacgaccaggattgggccgctgagcaa
gctagagtaacggatgtcacttcccagatccggactaaaattcagcagctggaagatgaa
gtcggtgaagttagagcagaggttgtcgatattcgtaaaaatttctgggaccatgtcacg
gttgacttcagtacggtggatgatgcaatcgaatcgcatgccagcttgaagcagcagtcg
gagattttgtttcatcgggagcaaagacatcgtcatgccgcggtcactcttggaaagctt
aggaggctggagcgttcaccctattttggccgaattgacttcgtagagcagggagagcaa
ataacggaaaagatttatttaggaatcgcaagctttttagatgaagccggcctttcgtat
ttggtctatgattggagagctcccatctctagtctttattatgactacgctcctggtcag
gcggcgtacgagacgccgaatggggcgattgctggagaaatgctgctcaaacggcaattc
atcattcgcgacggtgtgatggagctcatgttcgatacgggggtcaccataggtgacgag
ctgctcaaacgtgctctgagccgaagttctgatgctcaaatgaaaagcattgtagccacc
atccaaaaagagcaaaatcggatcatccgaaacgaccacagccgaatgctgatcgttcaa
ggagctgcaggcagcggaaaaacttcagcggctctgcagcgtgtcgcgtatctgctctat
aagcatcgagacactctgcaagccgatcagatggtgctgttctcacccaatccattgttc
aacagctatgtatctaccgtcctgccagagctgggtgaggagaacatgcagcagacgacg
tatcaagcatatttggagcatcggcttggttccatgttcgacatcgaagacccgtttacg
cagctggagtatgtgctaggcggtgctggtgtcgacggagacatcgctgtgaaggcggaa
ctcgagtgcgcccacgcatctgaaggggctattctactagagtcatgcaagggctcggaa
atatccgaagcagcttcgctatcccaagctaacggaaatttaggtgcaattgtgtctgag
gcgttaggagacaatagagcagcggagaaggcagggggacatgcgttatcaggtgcgcat
agggaacctagtgaatccaaaagggacggtacaaccatccgcgattctgcaggaatcgac
tatgtgtcccgaatcagcggtatccggttcaaatcatcagccgaatttttatacatgatc
caggggtataagcagcatctggaggcaagcggtatgaaattcaacccaattacttttcgc
ggcaagatcgtgattgacgtaaatcagatggcggagcatttctatagctacgaaaagggc
atccgtgtgccaaatcggttggagttgatgcagaagtggcttttggaccgattgaaaaag
ttttctgccgccgaaattcacgctccatgggtggatgaggccatcgagcttctggacgct
gatgactatcatagagcgtatcagcgtctgcgcaaaatgaaaggcggcgaaggtataacc
tttgacgacttcgaaaaggagcgcgggatgctggccaagattgtcgtcaaagaccagcta
aagccgctcagggaagatgtgaagcagcttgcttttgtggatatgacaggcctctatctt
caactgttcaaaaatccgcagttggcacaggacttatccgcaggcgcggagcttccggct
cattgggaaggcattgcaagccagacggagcggacgctgatgcaagggagcatgctgtat
gaggacgcgaccccttatctgtatctgatggagacggtcaaaggcttccatacgaatact
tccgttcgtcacgtcattgttgatgaggcgcaggactattccccatttcagctggaatac
ctgaagaggctgtttccgcgctcgcgcatgacggcgctcggcgatctcaatcaggcgatc
tactcgcacgcttccgcgtatagcgatatcgatccgcttgccgccttgtacggaccggat
caaacggagatcatccgtttgactcgcagctaccgctccacgcgtgagatcgtggagttc
acccgtggcatcgtacctggcggcgatgccattgagccttcaaccgcagcggcgcgaagc
cgctgctga
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