Paenibacillus hexagrammi: L0M14_27940
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Entry
L0M14_27940 CDS
T10205
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
phex Paenibacillus hexagrammi
Brite
KEGG Orthology (KO) [BR:
phex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phex03032
]
L0M14_27940 (gyrB)
03400 DNA repair and recombination proteins [BR:
phex03400
]
L0M14_27940 (gyrB)
Enzymes [BR:
phex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L0M14_27940 (gyrB)
DNA replication proteins [BR:
phex03032
]
Prokaryotic type
DNA Topoisomerases
L0M14_27940 (gyrB)
DNA repair and recombination proteins [BR:
phex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L0M14_27940 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UJF33308
UniProt:
A0ABY3SGZ0
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All DBs
Position
complement(6101057..6102973)
Genome browser
AA seq
638 aa
AA seq
DB search
MSVNQNAYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEVVDNSIDEALAGFCTR
IDVIVHKNNSITVIDNGRGIPVGENAKLKRPTLEVVLTVLHAGGKFGGDESGYKVSGGLH
GVGISVVNALSETLTVQVKREGKIYQQEYRRGTPQYDVKEVGETEETGTIVKFQPDPEIF
KETTEYDYDILQARIRELAFLNKGIEINLLDERTDTSNTYMYEGGIISFVEYLNRNREAV
NQTPIYVEGSKDNISIEIALQYNDSYTENIYSFANNINTHEGGTHESGFKSALTRILNDY
ARKSNSIKESDSNLSGDDVREGLAAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEK
LQTFLEENPATAKRIVEKGVQAARAREAARKARELTRRKSALEVSSLPGKLADCSSKDAS
ISEIYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNTEIRAMITAFGT
GISDDFDIAKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMKKLIEYGYVYIAQPPLYKL
ERNKIIRYAYNDKQREEIMQEFGDSMKVNVQRYKGLGEMNPDQLWETTMDPESRTLLQVT
IEDAIEADSIFDALMGDNVEPRRDFIEEHAKYVKNLDF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaatcaaaatgcgtatgatgaaagccagattcaggttctggaaggcttagaa
gcagtccggaaacggcctgggatgtatatcggctcgaccagctctcgcggacttcatcat
ctcgtgtgggaggttgtcgataatagtatcgacgaggctctggccggattttgtacgaga
attgatgtcatcgttcacaaaaataatagtataaccgtcattgataacggacggggaatt
ccagtcggcgagaacgcaaagctaaaacgtccgactcttgaggttgttctcaccgtgctt
cacgcaggcggtaaattcggcggagatgaatctggttataaggtttccggagggctgcat
ggtgtaggtatctccgttgtaaatgcgctttctgagacattgaccgttcaagtaaagcgc
gaaggaaagatttatcaacaggagtaccgtcgaggtacgcctcaatacgatgtcaaagag
gtcggagaaacagaagaaacagggacgatagtaaagttccagccggacccggaaattttc
aaagaaaccaccgaatacgactacgatatcttgcaagctaggattcgtgagctggcgttt
ttgaataaaggaatcgaaattaacctactggatgagcgtactgatacttcgaatacatac
atgtacgagggcggtatcatttcctttgttgagtacttgaaccggaatcgcgaggcagtg
aaccaaactccgatttacgtggaaggctccaaagataatatctccatcgagattgcctta
caatacaacgacagctatacagaaaacatttattctttcgctaacaatatcaatactcac
gagggcggaacacacgaatccggttttaaaagtgctttgacacggattctgaacgactat
gcccgcaaaagcaactccatcaaagagagtgactccaatctctcgggcgatgatgtacgt
gaaggactggctgcaattatttcggtgaaaattcccgagcctcagttcgagggtcaaacg
aagacgaagctaggtaacagtgaagtccgcggtattgtggagtctttgtttgccgagaag
ctgcagactttcctggaagagaacccggctaccgctaaacgcattgtagaaaaaggcgta
caggccgctcgtgcgagagaagcagctcgtaaagcaagagagcttacaagacgtaagagt
gcgcttgaggttagttctctccctggtaagcttgcggactgctcctccaaggatgcgtca
atcagtgaaatttacatcgtagaaggtgactccgcggggggatctgccaagcaggggcgc
gaccgtcatttccaagctattttgccactgcgcggtaaaattttgaacgtggaaaaagcg
agacttgataagattttatcgaatacagagattcgagccatgatcacagccttcggtacc
ggaattagtgatgacttcgatatcgctaaggctcgctatcacaaaatcatcattatgacc
gatgctgatgtcgacggcgcgcatatccgtaccctgctgctaactttcttttaccgttac
atgaagaagctgatcgaatacggctatgtctatatcgcacaaccccctctctataaactc
gaacgtaataagatcattcgttatgcttataatgacaagcagcgtgaggaaattatgcaa
gagttcggagatagtatgaaggtgaacgtacagcgctataaaggtctaggagagatgaat
ccagatcagctttgggaaaccaccatggacccggagagccgaactcttttgcaggttacc
attgaggacgccattgaagcggactccatctttgatgctctgatgggagataacgtagaa
ccgcgcagagattttatcgaagagcatgcgaaatacgtgaaaaacttggatttctaa
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