Phenylobacterium sp. NIBR 498073: O4N75_12295
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Entry
O4N75_12295 CDS
T10943
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
phey Phenylobacterium sp. NIBR 498073
Pathway
phey00541
Biosynthesis of various nucleotide sugars
phey01100
Metabolic pathways
phey01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
phey00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
O4N75_12295 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
phey01005
]
O4N75_12295 (rfaD)
Enzymes [BR:
phey01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
O4N75_12295 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
phey01005
]
Core region
O4N75_12295 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WGU38438
LinkDB
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Position
complement(2474702..2475700)
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AA seq
332 aa
AA seq
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MTRRIIFVTGGAGFIGSNIVAKLAEDPSLDVVVCDRLREAELGKWRNIAKHPIGDFVAPE
AMFEWLEKRWRDVELVVHMGAVSSTTEPDADKIIHSNFTLSRDLFRWCADHQRRFIYASS
AATYGDSVDFQDRDDLEWLTGLRPLNTYGWSKALFDLFAARQAARDYAPPQWVGLKFFNV
YGPNEEHKHSMKSVASQIWPKVRDGHSVQLFKSYREGVPDGGQTRDFVYVRDVADVIGWL
AKNEQVNGIYNLGSGTARTFEDLARAVFAAAGRAPEIEYTPMPPAIRDKYQYFTQAKMER
LQAAGYNQPMTTLEDGVSDYVKRYLSQPDPYR
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtcgcatcatcttcgtcactggcggcgccggcttcatcggttcgaacattgtc
gccaaactggccgaggacccttcgctggacgtggtggtctgcgaccggctgcgcgaggcc
gagctcggcaagtggcgcaacatcgccaaacacccgatcggcgatttcgtagcgcccgaa
gcgatgttcgagtggctggagaagcgctggcgcgacgtcgagctggtcgtccacatgggc
gcggtgtcctcgacgaccgaaccggacgccgacaagatcatccattcgaacttcacgctg
tcgcgcgacctgttccgctggtgcgccgatcaccagcgccgcttcatctacgcgtcgtcg
gccgcgacctatggcgattccgtcgacttccaggatcgcgacgacctggaatggctgacg
ggcctgcggccgctgaacacctatggctggtccaaggcgctgttcgacctgttcgccgcg
cgccaggccgcgcgcgattatgcgccgccgcagtgggtcgggctgaagttcttcaacgtc
tacgggccgaacgaagaacataagcactcgatgaagtcggtcgcctcgcagatctggccg
aaggtgcgcgacggccattcggtgcagctgttcaagtcgtaccgcgagggcgtgcccgac
ggcggccagacccgcgacttcgtctatgtccgcgacgtcgccgacgtgatcggctggctg
gccaagaacgagcaggtcaacggtatctacaacctgggctcggggaccgcccggaccttc
gaggacctggcgcgcgccgtcttcgccgcggccggccgggccccggagatcgagtacacg
ccgatgccgccggcgatccgggacaagtaccagtatttcacccaggccaagatggagcgg
ctgcaggcggccggttacaaccagccgatgacgaccctggaggacggcgtgagcgactac
gtgaagcgctatctctcccagcctgatccctaccgctag
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