KEGG   Phenylobacterium sp. NIBR 498073: O4N75_12930
Entry
O4N75_12930       CDS       T10943                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
phey  Phenylobacterium sp. NIBR 498073
Pathway
phey00010  Glycolysis / Gluconeogenesis
phey00020  Citrate cycle (TCA cycle)
phey00260  Glycine, serine and threonine metabolism
phey00280  Valine, leucine and isoleucine degradation
phey00310  Lysine degradation
phey00380  Tryptophan metabolism
phey00620  Pyruvate metabolism
phey00630  Glyoxylate and dicarboxylate metabolism
phey00640  Propanoate metabolism
phey00670  One carbon pool by folate
phey00785  Lipoic acid metabolism
phey01100  Metabolic pathways
phey01110  Biosynthesis of secondary metabolites
phey01120  Microbial metabolism in diverse environments
phey01200  Carbon metabolism
phey01210  2-Oxocarboxylic acid metabolism
phey01240  Biosynthesis of cofactors
Module
phey_M00009  Citrate cycle (TCA cycle, Krebs cycle)
phey_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
phey_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
phey_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:phey00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    O4N75_12930 (lpdA)
   00020 Citrate cycle (TCA cycle)
    O4N75_12930 (lpdA)
   00620 Pyruvate metabolism
    O4N75_12930 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    O4N75_12930 (lpdA)
   00640 Propanoate metabolism
    O4N75_12930 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    O4N75_12930 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    O4N75_12930 (lpdA)
   00310 Lysine degradation
    O4N75_12930 (lpdA)
   00380 Tryptophan metabolism
    O4N75_12930 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    O4N75_12930 (lpdA)
   00670 One carbon pool by folate
    O4N75_12930 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phey04147]
    O4N75_12930 (lpdA)
Enzymes [BR:phey01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     O4N75_12930 (lpdA)
Exosome [BR:phey04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   O4N75_12930 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 HI0933_like FAD_binding_3 GIDA DAO FAD_oxidored 2-Hacid_dh_C Lys_Orn_oxgnase Amino_oxidase AlaDh_PNT_C Thi4 3HCDH_N
Other DBs
NCBI-ProteinID: WGU38560
LinkDB
Position
complement(2601137..2602537)
AA seq 466 aa
MDFDVIVIGSGPGGYVTAIRASQLGFKTAIVEREALGGVCLNWGCIPTKALLKSGEAYEN
LSHMADYGLKIEKASFDFSKIIERSRKVAGQLNSGVAFLMKKHKIEVIEGVAKLEKGQGA
PKVVVALKAGGARTVQAKHVILATGARARTVPAIGMEPDGERIWTYREAMVPKAAPKSLI
VIGSGAIGIEFASFYRALGSDVTVIEALPRILPVEDEEVSKTAHKAFEKRGLKFRVGASV
KKLSKSKAGVTIELEAGGKAETLEADIAIVAIGIVGNVEDLGLEALGAKVEKTHVVTDAH
GGTGVPGLYAIGDVAGPPWLAHKASHEGVHCIEHIAGLKPNNLSSPIPGCTYSTPQIASV
GLTEAQAKEQGIEAKVGRFPFKVNGKAIAAGETDGFVKTVFDGKTGALIGAHMIGAEVTE
MIQGFTLAITLEATEEEVFATVFPHPTLSEAMHEAALDAYGRVLHI
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggatttcgacgtcatcgtcatcggctcggggcccggcggctatgtgaccgccatccgc
gccagccagctcggcttcaagaccgccatcgtcgagcgcgaagcgctgggcggcgtctgc
ctcaactggggctgcatccccaccaaggccctgctgaagtccggcgaggcctacgagaac
ctcagccacatggccgactacggcctcaagatcgagaaggcgagcttcgacttcagcaag
atcattgagcgttcgcgcaaggtcgccggccagctgaactcgggcgtcgccttcctgatg
aagaagcacaagatcgaggtcatcgagggcgtcgccaagctcgaaaaggggcagggcgcg
ccgaaggtggtcgtggcgctgaaggcgggcggcgcgcggacggtgcaggccaagcacgtg
atcctggccaccggcgcgcgggcgcgcacggtcccggcgatcggcatggagccggacggc
gagcgcatctggacctatcgcgaagcgatggttccgaaggcggccccgaagtcgctgatc
gtcatcggctcgggcgccatcggcatcgagttcgccagcttctacagggcgttgggctcg
gacgtgaccgtgatcgaggcgttgccgcgcatcctgccggtcgaggacgaggaggtttcg
aagaccgcccacaaggcgttcgagaagcgtggcctgaagttccgggtcggcgccagcgtc
aagaagctgtccaagtccaaggccggcgtgaccatcgaactggaagccggcggcaaggcc
gagacgctcgaggccgacatcgccatcgtcgccatcggcatcgtcggcaatgtcgaggac
ctggggctggaggctctgggcgcgaaggtcgagaagacccacgtggtcacagacgcccat
ggcgggaccggcgtgccgggcctctacgcgatcggcgatgtcgccggcccgccctggctg
gcgcacaaggccagccacgaaggcgtccactgcatcgagcacatcgccggcctgaagcct
aacaacctcagctcgccgatccccggctgcacctattcgacgccgcagatcgcctctgtc
ggtctgaccgaggcgcaggccaaggagcaggggatcgaggccaaggtcggccgcttcccg
ttcaaggtgaacggcaaggcgatcgccgccggcgaaaccgacggcttcgtgaagaccgtt
ttcgacggcaagaccggcgcgctgatcggcgcgcacatgatcggcgcggaagtcaccgag
atgatccagggcttcaccctggccatcaccctggaggccacggaggaggaggtgttcgcc
accgtcttcccgcacccgaccctgagcgaggcgatgcacgaggccgcgctcgacgcctat
ggacgcgtcctgcacatctga

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