Phenylobacterium sp. NIBR 498073: O4N75_14635
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Entry
O4N75_14635 CDS
T10943
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
phey Phenylobacterium sp. NIBR 498073
Pathway
phey03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phey00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O4N75_14635 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phey03021
]
O4N75_14635 (rpoB)
03400 DNA repair and recombination proteins [BR:
phey03400
]
O4N75_14635 (rpoB)
Enzymes [BR:
phey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O4N75_14635 (rpoB)
Transcription machinery [BR:
phey03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O4N75_14635 (rpoB)
DNA repair and recombination proteins [BR:
phey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O4N75_14635 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
WGU38888
LinkDB
All DBs
Position
complement(2930501..2934571)
Genome browser
AA seq
1356 aa
AA seq
DB search
MAQSFTGKKRIRKSFGRIPEAVQMPNLIEVQRSSYEQFLQREVRPADRRDEGVEAVFKSV
FPIKDFNERAVLEYVSYEFEEPKYDVEECVQRDMTFAAPLKVKLRLIVFETDEETGARSV
KDIKEQDVYMGDIPLMTEKGTFIVNGTQRVIVSQMHRSPGVFFDHDKGKTHASGKLLFAA
RVIPYRGSWLDFEFDAKDIVYVRIDRRRKLPATTFLMGLGMDGEEILSTFYDTVTYEKRG
TGWAAPYKAERWRGAKPDYPLIDADTGEEVAPAGQKISARNAKKFADGGLKTLLLAPEAL
YGRYLAGDLVNFETGEIYAEAGDELDAALLTALEEQGFDKLDILDVDEATVGAYIRNTLR
VDKNNSREDALFDIYRVMRPGEPPTVEAAEAMFKSLFFDSERYDLSSVGRVKMNMRLELD
CPDDVRILRKEDVLAVLQTLVGLRDGKGEIDDIDNLGNRRVRSVGELLENQYRVGLLRME
RAIKERMSSVDIDTVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATHAVVNKYGFIESPYR
RIKDGKTTEEVVYMSAMEEAKHVIAQANIKLDGGEIVEDLVPGRINGEPSLLPKDTVDLM
DVSPKQVVSVAASLIPFLENDDANRALMGSNMQKQAVPLIQSDAPLVGTGMEAVVAVDSG
AVVVARRTGVVEQIDGTRIVIRATEETDPTKAGVDIYRLQKFQRSNTSTCINQRPLVRVG
DKVASGDVIADGPSTELGELALGRNTLVAFMPWNGYNFEDSILISERIVRDDIFTSIHLE
EFEVMARDTKLGPEEITRDIPNVGEEALRNLDEAGIVAIGAEVQPGDILVGKVTPKGESP
MTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVEVRVFNRHGVDKDERAMAIERAEID
RLGKDRDDEFAILNRNMTIRLRELLIGKTAVSGPKGLGRGEITADKLEEIAPGLWWQIAM
DDEKAMGELEAMRRQFDEARKRLDRRFEDKVDKLQRGDELPPGVMKMVKVFVAVKRKLQP
GDKMAGRHGNKGVISKILPIEDMPYLESGQHVDIVLNPLGVPSRMNVGQIFETHLGWAAA
GLGKQIADLLEAWQNGGQKQALIDHLRQTYGVDQELPDREEELIELAKNLSKGVPFATPV
FDGAHIDDIENLLESAGLARSGQSILYDGQTGEQFKRPVTVGYIYMLKLHHLVDDKIHAR
SIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYE
SIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENG
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatccttcactggaaagaagcggatccgtaagtctttcggccgcatccccgaa
gccgtgcaaatgccgaacctgatcgaggttcagcgctcctcctatgaacagttcctgcag
cgcgaagtgcgcccggccgaccgccgcgacgagggcgtcgaggcggtgttcaagtcggtg
ttcccgatcaaggacttcaacgagcgcgccgtgctcgaatacgtgtcctacgagttcgaa
gagccgaagtacgacgtcgaggaatgcgtccagcgcgacatgaccttcgccgcgccgctg
aaggtcaagctgcgcctgatcgtgttcgagaccgacgaagagaccggcgcccgctccgtg
aaggacatcaaggagcaggacgtctacatgggcgacatcccgctcatgaccgagaagggc
acctttatcgtcaacggcacgcagcgggtcatcgtctcgcagatgcaccgttcgccgggc
gtgttcttcgaccacgacaagggcaagacccacgcgtcgggcaagctgctgttcgccgcc
cgcgtgatcccgtaccgcggctcgtggctcgacttcgagttcgacgccaaggacatcgtc
tacgtccgcatcgaccgtcgccgtaagctgccggccacgaccttcctgatgggcctgggg
atggacggcgaggaaatcctctcgacattctatgataccgtcacctacgagaagcgcgga
accggctgggccgctccgtacaaggccgagcgttggcgcggcgccaagccggactacccc
ctgatcgacgccgacacgggcgaagaagtggcgccggccggccagaagatctcggcccgc
aacgccaagaagttcgccgacggcggtctgaagaccctgctgctggcccccgaggcgctc
tatggccgctacctggccggcgacctggtcaacttcgagaccggcgaaatctacgccgaa
gccggcgacgagctggacgcggcgctgctgaccgcgctcgaggagcagggcttcgacaag
ctcgacatcctcgacgtcgacgaagccacggtcggcgcctacatccgcaacaccctgcgc
gtggacaagaacaacagccgtgaagacgcgctgttcgacatctaccgcgtgatgcgtccg
ggcgagccgccgacggtcgaagccgccgaagccatgttcaagtcgctgttcttcgactct
gagcgctacgacctttcctcggtcggccgcgtgaagatgaacatgcgcctggagctcgac
tgcccggacgacgtgcgcatcctgcgcaaggaagacgtgctggcggtgctgcagaccctg
gtcggcctgcgcgacggcaagggcgaaatcgacgacatcgacaacctgggcaaccgccgg
gtgcgctcggtcggcgagctgctggagaaccagtaccgcgtcggcctgctgcgcatggag
cgggcgatcaaggagcgcatgtcgagcgtcgatatcgacaccgtcatgccgcacgacctg
atcaatgcgaagccggcggccgccgctgtccgcgagttcttcggatcctcgcagctctcg
cagttcatggaccagaccaacccgctgtcggaaatcacccacaagcgtcgtctctcggcg
cttggcccgggcggtctgacccgcgagcgcgccggcttcgaagtccgcgacgtgcacccg
acccactacggccggatctgcccgatcgagacgccggaaggtccgaacatcggcctgatc
aactcgctggccacccacgcggtggtcaacaagtatggcttcatcgagagcccgtaccgg
cggatcaaggacggcaagacgaccgaagaggtcgtttacatgtcggcgatggaagaggcc
aagcacgtcatcgctcaggccaacatcaagctggacggcggcgagatcgtcgaggacctg
gtccccggccggatcaacggcgaaccttcgctgctgccgaaagacaccgtcgacctgatg
gacgtctcgcccaagcaggtcgtctcggtcgccgcctcgctgatcccgttccttgagaac
gacgacgccaaccgcgccctcatgggctcgaacatgcagaagcaggccgtgccgctcatc
caatcggatgcgccgctggtcggcaccggcatggaagcggtcgtggccgtcgactccggc
gccgtcgtggtcgcccgccgcaccggcgtggtcgagcagatcgacggcacccggatcgtc
atccgcgccacggaagagaccgacccgaccaaggccggcgtcgacatctaccgcctgcag
aagttccagcgttcgaacacctcgacctgcatcaaccagcgtccgctggtgcgcgtgggc
gacaaggtggccagcggcgacgtcatcgccgacggcccgtcgaccgagctgggcgaactg
gcgctgggccgcaacaccctcgtcgcgttcatgccgtggaacggctacaacttcgaggac
tcgatcctgatctccgagcgcatcgtgcgcgacgacatcttcacctcgatccacctcgag
gagttcgaggtgatggcccgcgacaccaagctgggtccggaagaaatcacccgcgacatc
ccgaacgtcggcgaggaagccctgcgcaacctcgacgaggcgggcatcgtggcgatcggc
gccgaagtccagccgggcgacatcctggtcggcaaggtcacgccgaagggcgaaagcccg
atgacgccggaagaaaagctgctgcgcgccatcttcggtgaaaaggcctccgacgtgcgc
gacacgtcgctgcgcctgccgccgggcgtggccggcacgatcgtggaagtccgcgtcttc
aaccgtcacggtgtggacaaggacgagcgcgcgatggccatcgagcgcgccgagatcgac
cgcctgggcaaggaccgcgacgacgagttcgcgatcctgaaccgcaacatgaccatccgt
ctgcgcgaactgctgatcggcaagaccgccgtttcgggtccgaagggcctgggccgcggc
gagatcaccgccgacaagctggaagagatcgcgccgggcctgtggtggcagatcgccatg
gacgacgagaaggcgatgggcgaactggaggccatgcgccgtcagttcgacgaggcccgt
aagcgcctcgaccgtcgcttcgaggacaaggtcgacaagctgcagcgcggcgacgaactg
cccccgggcgtcatgaagatggtcaaggtcttcgtggccgtgaagcgcaagcttcagccg
ggcgacaagatggccggccgtcacggcaacaagggggtcatctccaagatcctgccgatc
gaggacatgccctacctggaaagcggccagcacgtggacatcgtgctgaacccgctgggc
gtgccgtcgcggatgaacgtcggccagatcttcgaaactcacctgggatgggccgctgcg
ggcctcggcaagcagatcgctgatctgctggaagcctggcagaacggcggccagaagcag
gcgctgatcgaccatctgcgccagacctacggcgtcgaccaggagcttccggacagggaa
gaggagctgatcgagctggcgaagaacctcagcaagggcgtgcccttcgcgactccggtc
ttcgacggcgcgcacatcgacgacatcgagaacctgctcgagtcggcgggcctggcgcgt
tcggggcagtcgatcctgtacgacggccagaccggcgagcagttcaagcgtccggtcacg
gtcggctacatctacatgctgaagctgcaccacctggtcgacgacaagatccacgcccgt
tcgatcggcccgtactcgctcgtcacccagcagccgctgggtggtaaggcgcagttcggc
ggtcagcgcttcggggaaatggaagtgtgggctctggaagcctacggcgcggcctacacc
ctgcaggaaatgctgacggtgaagtccgacgacgtggccggccggaccaaggtctacgag
tccatcgtccgcggcgacgacaccttcgaagccggcatccccgagagcttcaacgtgctc
gtgaaggaaatgcgctcgctgggtctgaatgtggagctggagaacggctag
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