Phenylobacterium sp. NIBR 498073: O4N75_15925
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Entry
O4N75_15925 CDS
T10943
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phey Phenylobacterium sp. NIBR 498073
Brite
KEGG Orthology (KO) [BR:
phey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phey03032
]
O4N75_15925
03400 DNA repair and recombination proteins [BR:
phey03400
]
O4N75_15925
Enzymes [BR:
phey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
O4N75_15925
DNA replication proteins [BR:
phey03032
]
Prokaryotic type
DNA Topoisomerases
O4N75_15925
DNA repair and recombination proteins [BR:
phey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O4N75_15925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WGU39127
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All DBs
Position
3174301..3175320
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AA seq
339 aa
AA seq
DB search
MPRDTGPPPAGDLTYVNDHDPGLSRTMGPAGFAYRDSQGAPVRDKATLNRIAALVLPPAW
TNVWICASPRGHIQATGRDARGRKQYRYHDLWSQAQAGEKFERLIAFGRALPKLRAQVDR
DLRRRGLPREKVLAAVVALMELTLIRVGNSEYAKTNKSFGLTTLRDRHAEITGGGAVFEF
RGKSGKVHRTGFRDRRLARIVKACQDVPGQRLFQYVDDAGARRAVESSDVNAYIRAIVGE
GFSAKDIRTWAGTLYTARGLVEQPPAKDAAEARRRVATAVKAAATLLGNTAAVCRSSYIH
PLVLEAYERGALPLKKGASPRAFELAVLRFLEAAQEAAR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgacacaggtccgccgccggccggcgaccttacctatgtgaacgatcacgat
ccgggcctatcgcggacgatgggtcccgcgggtttcgcgtaccgcgactcccagggagcg
ccggtgcgcgacaaggcgacactgaaccggatcgccgcgctggtgctgcctccggcctgg
acgaacgtctggatctgcgcctcgccgcgcggccatatccaggcgaccggccgcgatgcg
cggggccgcaagcagtaccgctaccacgatctctggagccaagcgcaggcgggcgagaag
ttcgagcgtctgatcgccttcggccgcgccctgcccaagttgcgcgcccaggtcgatcgc
gacctgcgccgccggggcctgccgcgcgagaaggtgctggcggcggtggtggcgctgatg
gaactgaccctgatccgggtcggaaacagcgagtacgccaagaccaacaagagcttcggc
ctgaccaccctgcgcgaccgtcacgccgaaatcaccggcggcggggcggtgttcgagttt
cgcggcaagagcggcaaggtccatcgcaccggcttccgcgaccggcgcttggcgcggatc
gtcaaggcctgccaggacgtgcccggccagcgattgttccagtacgtcgacgacgccggc
gcgcggcgggcggtggagtccagcgacgtcaacgcctacatccgcgcgatcgtcggcgag
ggcttttcggccaaggacatccgcacctgggccggtacgctctacaccgcccggggcctc
gtcgagcagccccccgccaaggacgccgccgaggccaggcgccgggtcgcgacggcggtg
aaggcagccgccaccctactcggcaacaccgccgcggtgtgccgcagctcctacatccat
ccgctggtgttggaggcctacgagcgaggcgccttgccgctgaagaagggcgcttcgcca
cgggccttcgagcttgcggtgctgcgctttctcgaagcggcgcaggaggccgcgcggtga
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