Phenylobacterium sp. NIBR 498073: O4N75_18385
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Entry
O4N75_18385 CDS
T10943
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
phey Phenylobacterium sp. NIBR 498073
Pathway
phey00300
Lysine biosynthesis
phey00470
D-Amino acid metabolism
phey01100
Metabolic pathways
phey01110
Biosynthesis of secondary metabolites
phey01120
Microbial metabolism in diverse environments
phey01230
Biosynthesis of amino acids
Module
phey_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phey00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O4N75_18385 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O4N75_18385 (lysA)
Enzymes [BR:
phey01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
O4N75_18385 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WGU39598
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Position
3681732..3683015
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AA seq
427 aa
AA seq
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MNHFELKGGELFCEGVSLADIASAVGTPVYVYSSATFERHYTVLRDALVAEGIKGDDGGD
PLIAFAVKANSNLAVLRTLAKLGAGADTVSEGEVRRALAAGVPAEKIVFSGVGKTEGELA
FALKAGVGEINVESEPEMRLASQVAQSLGTRATIAIRVNPDVSAGGHAKISTGKSDNKFG
VSFSEAERLYANASNDAGLNPVGVTCHIGSQITDLEPMAQAFAKMRGLVERLRGEGLSVQ
RLDLGGGLGVPYFNQPEPPSPTDYARMIAKTMNGLDVGYAFEPGRMIAANAGVLLARVQH
IHERPEGKKFVVLDAAMNDLIRPAMYDAYHEIVPVHPRAGEPVVYDVVGPICETGDTFTR
ERAMPPLQAGDLVAFLSAGAYGAVMSSEYNSRLLVPEVLVKGGAYAVVRPRPSYEDMLAR
EAPAPWQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattttgagctgaagggcggcgagctcttctgtgagggcgtgtccctggccgac
atcgcttcggcggtcggcaccccggtctatgtctattccagcgccaccttcgagcggcac
tatacggtgctgcgcgacgccctggtcgccgagggcatcaagggcgacgacggcggcgat
ccgctgatcgccttcgcggtcaaggccaactccaacctggccgtcctgcgcaccctcgcc
aagctcggcgcgggcgccgacacggtgtccgagggcgaggtccgccgcgccctggccgcc
ggcgtcccggccgaaaagatcgtcttctcgggcgtcggcaaaaccgagggggagctggcc
ttcgcgctcaaggcgggggtcggcgagatcaacgtcgagtcagagcccgagatgcgcctg
gccagccaggtcgcccagtctctgggaacccgcgccaccatcgccatccgcgtcaatccg
gacgtctcggccggcggtcacgccaagatctcgaccggcaagtccgacaacaagttcggc
gtctcgttctccgaggccgagcggctctacgccaacgcctcgaacgatgcgggccttaat
ccggtcggcgtcacctgccatatcggcagccagatcaccgacctggaaccgatggcccag
gcgttcgccaagatgcgcggcctggtcgagcgcctgcgcggcgagggactgtccgtccag
cgcctcgacctcggcggcggcctgggcgtgccctacttcaaccagcccgagccgccctcc
cccaccgactatgcgcggatgatcgccaagaccatgaacggactggacgtcggctacgcc
ttcgaacctgggcggatgatcgcggcgaacgccggcgtgctgctagcccgggtccagcac
atccacgaacgcccggaaggcaagaagttcgtcgtcctcgacgcggcgatgaacgacctg
atccgcccggcgatgtacgacgcctatcacgagatcgtcccggtccatccgcgcgcgggc
gagcccgtcgtctacgacgtggtcgggccgatctgcgaaaccggcgacaccttcacgcgc
gagcgggccatgccgccgctgcaggccggcgacctggtcgccttcctcagcgccggcgcc
tacggggcggtgatgtccagcgagtacaacagccgcctgctggtccctgaagtgctggtc
aagggcggcgcctacgccgtcgtgcgcccgcgcccgagctacgaagacatgctcgccaga
gaggcccccgccccctggcagtaa
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