Phenylobacterium sp. NIBR 498073: O4N75_21080
Help
Entry
O4N75_21080 CDS
T10943
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
phey Phenylobacterium sp. NIBR 498073
Pathway
phey00300
Lysine biosynthesis
phey00470
D-Amino acid metabolism
phey01100
Metabolic pathways
phey01110
Biosynthesis of secondary metabolites
phey01120
Microbial metabolism in diverse environments
phey01230
Biosynthesis of amino acids
Module
phey_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phey00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O4N75_21080 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O4N75_21080 (dapF)
Enzymes [BR:
phey01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
O4N75_21080 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WGU40100
LinkDB
All DBs
Position
complement(4249312..4250139)
Genome browser
AA seq
275 aa
AA seq
DB search
MSRPFLKMNGLGNDFVVVEARTAPFAPTAAEVRAIADRQAGVGCDQLVSIEPSEKADARV
RFWNADGDEVGACGNASRCVGWLLMEASGRDQAVIETQGGLLTATRAGDKIVSVDMGEPG
LDWRQIPLEEEMDTRGIELQVGPIDDPILHTPGCVSMGNPHVVFFVPDAEAAPVVQVGPM
IEHHRLFPEGVNVGFAQIVARDRIRLKVWERGAGLTKACGTGACAALVASYRRGLVDRKA
TLVLDGGELVIEWRESDGHVIMTGPAQVDFTGTLP
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgttcctgaagatgaacgggctcggcaacgacttcgtcgtggtcgaggcc
cgcaccgcccccttcgcgcccactgcggcggaggtgcgcgcgatcgccgaccgccaggcc
ggggtcggctgcgatcagctggtttctatagagccgtcggaaaaagctgacgctcgcgtg
cggttctggaacgccgacggcgacgaggtcggggcctgcggcaacgccagccgctgcgtc
ggctggctgctgatggaggcctctggtcgcgaccaggcggtgatcgagactcaaggcggc
ctgctgaccgcgacccgcgccggcgacaagatcgtcagcgtcgacatgggcgagccgggc
ctcgactggcggcagatcccgctggaggaggagatggacacccgcggcatagagctgcag
gtcggccccatcgacgatccgatcctgcacacgcccggctgcgtctcgatgggcaatccg
cacgtggtgttcttcgtgccggacgccgaggctgcgccggtggtgcaggtcggcccgatg
atcgagcatcaccggctgttcccggagggcgtcaatgtcggcttcgcccagatcgtcgcc
cgcgaccgcatccggctgaaagtgtgggaacgcggcgcgggcctgaccaaggcctgcggc
accggcgcctgcgcggcgctggtggcctcctatcgccgcggcctcgtggatcgcaaggcg
accctggtgctggacggcggcgagctggtcatcgagtggcgcgagagcgacggccatgtg
atcatgaccggccccgcccaggtggatttcaccggaaccctgccgtga
DBGET
integrated database retrieval system