Ectopseudomonas hydrolytica: NLY38_00100
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Entry
NLY38_00100 CDS
T08519
Name
(GenBank) type III effector HopM1
Organism
phf
Ectopseudomonas hydrolytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7760
Motif
Other DBs
NCBI-ProteinID:
UTH31741
LinkDB
All DBs
Position
20593..22692
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AA seq
699 aa
AA seq
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MQGRQAERAARPQSALERYESTFPALRELRQKAQREAARQADTDRPAYHPLEAAKRRMLI
EGELLRAHPSLSLQQASEILNMGHVEQLASPIPYGDSLEKMATALDQLFAPGRQDELPSL
VQLGAILDQGLGEISRHLEGQLDLYRQVLQHTLLDDTERAQVKAGQQALQAMAERWTEDI
KGKVLGKALALAESRLQDQQRAQQQSPDQMEVQTRQWQNIRDYLKSAQDAFDTRGEFGTA
LQHVRLDSQVEAMNASNQGLFSAMRSFMANGVPPGIASTLLYVMARAYVSPQLAGAEFVA
RALGSGMAIGAVHETLDNFAKPAAREVLASLGMTELREVDPSEVIPDPPRAVIVEGRYQE
RDAGQMAEAQAEVEQARKAFLNAQQDYKTGTLKGDAITLTSLPGAQAARELVNLLSTQNA
ASTGAMALAAFLGNAGMYGLQAMGQRQKAFSHEGHDLPTHVPKPAPQEALGRRLGNVLKD
GLSTINPLDASVRQKYDSKGWSAALGMMGYNSVEGSIRQLDTSTTGGMASSVILTGLQTF
LMQQVFYANKPAGDEAEAGGTGRFDNALNNIRDPDRETLPHGSRPGTTERRIENTYDRLR
GVIQGPPQAATEITEAVTSTVVSGLGQLGRQVAEQASRQQQRLASEVSTRVFNTLAGGLE
HVGRQVAEQAMRQRDRFRAAEPPGDIEMGLQAPRDRDNV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggggcgtcaggccgagcgcgcggccaggccgcagagtgcgctcgaacgctacgaa
tccacctttccagcgctacgcgagttacgccagaaggctcagcgtgaggcggcccggcag
gcggacacggacagaccggcctatcaccccctggaggctgccaagcggcgcatgctgatc
gaaggtgaattgctgcgggcgcacccttcgctgagcctgcagcaggcgtcggagattctc
aatatggggcatgtcgagcagttggcctcgccgattccctatggcgacagcctggagaaa
atggcgaccgctcttgaccagttgttcgccccgggccggcaggatgagttgccgtccctg
gtgcaattgggcgcgatactggaccagggccttggtgagatatcgcgccacctggaaggg
cagttggatctgtatcggcaggtactgcagcacaccttgctggatgacaccgagcgagct
caggtgaaagccgggcagcaggccttgcaggcgatggcagagcgctggacggaggacatc
aagggcaaggtgctgggcaaggcgctggcgctggccgaaagccgcctgcaagaccagcaa
agggcccaacagcaaagccctgatcaaatggaagtccagacccggcaatggcaaaacatc
cgtgactacctcaagagcgcacaggacgcgttcgatacgcgaggtgagttcggcacagcc
ttgcagcatgtccggctcgacagccaggtagaggcaatgaatgccagtaaccagggcctg
ttttccgcgatgcgttcgttcatggccaatggcgttccgccgggtatcgcctcgacattg
ctctatgtgatggcacgcgcctatgtctcaccgcagttggccggggcagaattcgtcgct
cgcgcgctgggcagtggcatggccatcggtgcagtgcatgagaccctggacaacttcgcc
aaaccggcggcgcgtgaggttctggcctcgctgggtatgacggagttgcgcgaggtcgac
ccgagcgaagtcatcccggacccacctcgagcggtgatcgtcgaggggcgttaccaggag
cgtgacgccggacaaatggccgaagcccaggccgaggtcgagcaggcgcgcaaggcgttc
ttgaatgcacagcaggactacaagaccgggacgctcaagggcgatgcgatcacgctgacc
agcctgcccggagcgcaggcggctcgcgagctcgtcaacctgctgtctacacaaaatgcc
gcatcaaccggggcgatggcactggctgcgtttctgggcaatgccggcatgtatggcctg
caggcgatgggacaacggcagaaggcgttcagccatgaggggcatgacctgccgacccac
gtacccaagccggcgccacaggaggctctgggccggcgcctgggcaatgtgctcaaggat
gggctgtcgacgatcaatccgctggatgcctcggtcaggcagaagtacgacagcaagggg
tggagcgctgcactgggcatgatgggctacaacagcgtcgaaggttccatcaggcagctg
gacaccagtacaaccggcggcatggcctcgtccgtgatactcacggggctgcagaccttt
ctcatgcaacaggtgttctatgccaacaagcctgccggcgacgaggccgaggcgggcggc
accggccgtttcgacaacgcgctgaacaatatccgtgatcccgatcgggaaaccttgccc
catggctcgcgcccgggcacgacagagcgccggatcgaaaacacctacgaccgtctgcgt
ggagtgattcaagggccaccgcaggccgcgaccgagatcaccgaggccgtgaccagcacg
gtcgtgagcggtcttgggcaactggggcgccaggtggccgagcaggcttcgcggcagcag
caacggcttgcgtccgaggtcagcaccagggtgttcaatacgcttgcaggcgggctcgag
cacgtggggcgtcaggtggcggagcaggccatgagacagcgcgaccggttcagggcggcg
gagccgccaggcgatatcgaaatgggtttgcaggcacctcgggatcgagacaacgtctga
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