KEGG   Ectopseudomonas hydrolytica: NLY38_00460
Entry
NLY38_00460       CDS       T08519                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
phf  Ectopseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:phf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phf02044]
    NLY38_00460 (tssF)
Secretion system [BR:phf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NLY38_00460 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: UTH31809
LinkDB
Position
87049..88839
AA seq 596 aa
MSFNHYYQSELTALRQLGKRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLD
DELPELTHSLMHLLWPNYMRPLPAFSMLQFDPLTRPGPALPVKRGTPVEAKAIEGVTCRF
RTCFPTEVLPLALNGLDYSVKGDGALLSLRLGMSADGHLGEIGLNKLRLHLAGERYIGQM
LYLALLRNLGGIQLVLLDAAGKPMQDAFGQTLGTLQLKPEQVQPVGFAEDEALIPYPLNT
FRGYRYLQEYFAFQDKFLFVDLLGLDAIHGLPEDLLKQARGLELRFDIHKAGVQRIRPTL
ENVRLYCTPVVNLFQHDAIPIRLDGKQDQYLLLPAEFDAQHCGVFSVDRVTGWKPGGMGY
EEYVPFESFEHDPSFDVPVARPHYSVRQQPSMLGDGLETWLSFGLRNLDQHETLSIELTC
TNQNLPRQLSLGDICLPSEDTPDFLSFRNISAVTPSYAPPLHRDFLWKLISNMSLNYLSL
ANVEALKVILETYDLPRYYDQHAERVSKRLLGGLKSIGHRHVDRLHRGLPVRGVRTELTM
NPDGYLGEGDLFLFASVLNEFFALYASLNSYHELHVQSTQGELYKWTPRMGQQPLL
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgtctttcaaccactactaccaaagcgaactcaccgccctgcgccaactgggcaagcgc
tttgccgagcgcagcccggcgctggcgccgtttctcggccaggccgggcgtgatccggat
gtcgagcgcctgctcgaaggcttcgccttcctcaccgggcgcctgcggcagaagctcgac
gacgagctgccggagctgacccattcgctgatgcacctgctgtggccgaattacatgcgc
ccgctgccggccttcagcatgctgcagttcgatccgctgacccgccccggtccggcgttg
ccggtcaagcgcggcacgccggtggaggccaaggccatcgagggcgtcacctgccgcttt
cgcacctgcttccccacggaggtgctgccgctggcgctgaacggcctggactactcggtg
aagggcgacggcgcactgctcagcctgcgtctgggcatgagcgccgacggccatctcggc
gagatcggcctgaacaagctgcgtctgcacctggccggcgagcgctatatcggccagatg
ctctacctggcgctgctgcgcaacctcggcggcatccagctggtgctgctcgatgcggcc
ggcaagcccatgcaggatgccttcggccagactctcggcaccctgcagctcaagcccgag
caggtgcagccggtgggcttcgccgaggacgaggcgctgatcccctatccgctcaacacc
ttccgcggctaccgctacctgcaggaatacttcgccttccaggacaagttcctcttcgtc
gacctgctcggcctggatgccatccacggcctgcccgaggatctgctcaagcaggcgcgc
ggcctggagctgcgcttcgatatccacaaggccggggttcagcgcatccgcccgaccctg
gaaaacgtgcgcctgtactgcaccccggtagtcaacctgttccagcacgacgccatcccg
atccgcctcgacggcaagcaggaccagtacctgctgctgccggccgaattcgacgcgcag
cactgcggcgtgttctcggtggaccgcgtcaccggctggaagccgggcggcatgggctac
gaggagtacgtgccgttcgagtcgttcgagcacgaccccagcttcgacgtgccggtggcg
cgcccgcactacagcgtgcgtcagcagccgtcgatgctcggcgacggcctggagacctgg
ctcagcttcggcctgcgcaacctcgaccagcacgagacgctgtccattgagctgacctgc
accaaccagaatctgccgcgtcagctgagcctgggcgatatctgcctgcccagcgaggac
accccggattttctcagcttccgcaatatcagcgccgttacaccgagttatgcaccgccg
ctgcaccgcgacttcctgtggaagctgatttccaacatgtcgctgaactacctgtcgctg
gccaacgtcgaggcgctcaaggtgatcctcgagacctacgacctaccgcgctactacgac
cagcacgccgagcgcgtcagcaagcgcctgctcggtggcctcaagagcatcggccaccgc
catgtcgaccgcctgcatcgcggcctgccggtacgcggcgtgcgcaccgaactgaccatg
aatccggacggctacctgggcgagggcgacctgttcctcttcgcctcggtactcaatgaa
tttttcgccctctacgccagcctcaacagctaccacgagctgcacgtacagagcacacag
ggagagttgtacaaatggacgccacgcatggggcagcagcccctgctctga

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