KEGG   Ectopseudomonas hydrolytica: NLY38_00470
Entry
NLY38_00470       CDS       T08519                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
phf  Ectopseudomonas hydrolytica
Pathway
phf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:phf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NLY38_00470 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phf02044]
    NLY38_00470 (tssH)
Secretion system [BR:phf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NLY38_00470 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_22 ClpB_D2-small AAA_16 NACHT nSTAND3 TniB Sigma54_activat AAA_7 ResIII Clp_N AAA_25 ABC_tran_CTD AAA_24 NBD_SMAX1 DUF5947 FtsK_SpoIIIE T2SSE Hpr_kinase_C SLFN-g3_helicase DUF4407 Acetyltransf_6
Other DBs
NCBI-ProteinID: UTH31811
LinkDB
Position
89822..92422
AA seq 866 aa
MINVDLQQLVQALDAASKRDLEMAAERCVVRGGNKILVEDLLLGLLERPESLLARALQDA
EIDAGELAQALQPRGEHSESRNPVFSAELVQWLQDALLVANLELGASQIDQAALILALLR
NPMRYAGSRYQTLLSKLNAERLRDFALSQQPQAAGGKAAAPGESNLARFTHNFTQQARDG
KLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLALRIATGEVPQVLKGV
ELLCLDLGLLQAGASVKGEFERRLQGVIDEVKASPKPIILFIDEAHTLIGAGGQAGSGDA
ANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPSVDEAVTILRGLAP
VYEKSHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPEALERL
RGEIAEGERQGEAMRRDLDAGLSIDGEALDALETRLVAARAELEQVETRWAIQRDLAERL
LEQRKQCAAARLAGDAEETDEPRASLEELEAELRALQAELAAAQASERLVSFEVCPRLVA
EVISHWTGVPLSQLAREHNTKVITFADDLRQRVRGQEQAIQALDKAMRATAAGLNRPDAP
VGVFLLVGPSGVGKTETALALADLLYGGERFLTVINMSEFQEKHTVSRLIGAPPGYVGYG
EGGMLTEAVRQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGEGREINFRNTLILMT
SNLASERIASLCAGGERPAAEDLELAIRPQLTQHFKPALLGRMRVVPYYPMDGDLLRQLV
GLKLARFGERLARRQLAFSHCDGLVEHLAERCTHGDSGARLIDHLIDQHLQPLVVDRLLD
AMASGETLQQVRATLNGEGTVVCEFA
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgatcaacgtcgacctgcaacaactggttcaagctctggacgctgcgagcaagcgcgac
ctggagatggccgccgaacgctgcgtggtacgcggcggcaacaagatcctcgtcgaggac
ctgctgctgggtctgctcgagcgcccggaaagcctgctggcgcgtgccctgcaggatgcc
gagatcgatgccggcgagctggcccaggcgctgcagccgcgcggcgagcacagcgagtcg
cgcaacccggtattttctgccgaactggtgcaatggctgcaggacgccctgctggtggcc
aacctggagctgggcgccagccagatcgaccaggccgcgctgatcctcgccctgctgcgc
aaccccatgcgctacgccggcagccgttatcagacgctgctgagcaagctcaatgccgag
cgtctgcgcgacttcgcccttagccagcagccgcaggccgcgggcggcaaagcggcggcg
ccgggcgagtcgaacctggcgcgctttacccacaacttcacccagcaggcccgcgacggc
aagctcgacccggtgctgtgccgcgacggcgcgatccgccagatggtcgatatcctcgcc
cgccggcgcaagaacaaccccatcgtggtcggcgaggcgggtgtgggcaagaccgccatc
gtcgagggcctggccctgcgcatcgccaccggcgaggtgccgcaggtgctcaagggcgtc
gagctgctgtgcctggacctcggcctgctgcaggccggcgccagcgtcaagggcgagttc
gagcgccgcttgcagggcgtgatcgacgaggtcaaggcctcgcccaagccgatcatcctg
ttcatcgacgaagcccatacgctgatcggcgccggtggccaggccggcagcggcgatgcc
gccaacctgctcaagccggcgctggcccgtggcgagctgcgcaccatcgccgccaccacc
tggagcgaatacaagaagtacttcgagaaggacccggccctggcccgtcgcttccagccg
gtgcaactgcacgagccgagcgtcgacgaggcggtgaccatcctgcgcggcctggcgccg
gtgtacgagaagagccacggcatctacttgcgcgacgacgcggtggtcgccgccgccgag
ctgtcggcacgctacctcgctggtcgccagttgccggacaaggcggtggacgtactcgac
actgcctgcgcccgcgtgcgcatcagcctggccgcagcacccgaggcgctggagcgcctg
cgcggcgagatcgccgagggcgagcgccagggcgaggccatgcgccgcgacctggacgcc
ggcctgagcatcgacggcgaagcgctggatgccctggaaacccgcctggtcgccgcccgc
gccgaactggagcaggtggaaacccgctgggcgatccagcgcgacctggccgagcgtctg
ctcgagcagcgcaagcagtgcgccgcggcgcgtcttgctggcgacgcagaggaaaccgac
gagccacgtgccagcctggaggaactggaagccgaattgcgcgcgctccaggccgagctg
gccgcggctcaggccagtgagcgcctggtcagcttcgaggtctgcccgcgcctggtggcc
gaggtgatcagccactggaccggcgtgccgctgagccagctggcgcgcgagcacaacacc
aaggtcatcaccttcgccgacgacctgcgccagcgcgtgcgcggccaggagcaggcgatc
caggcgctggacaaggccatgcgcgccaccgctgccggcctcaaccggcccgatgcgccg
gtgggcgtgttcctcctggtcggccccagcggcgtcggcaagaccgagaccgccctggcc
ctggccgacctgctgtatggcggtgaacgcttcctcaccgtgatcaacatgtccgagttc
caggaaaaacacaccgtctcgcgtctgatcggcgcgccgcccggctacgtcggctacggc
gaaggcggcatgctcaccgaagccgtgcggcagaagccctactcggtgatcctcctcgac
gaggtggagaaggccgacccggacgtgatgaacgtcttctaccagatcttcgacaagggc
gtggccaacgacggcgaagggcgcgagatcaacttccgcaacacgctgatcctgatgacc
agcaacctggccagcgaacgcatcgccagcctttgtgctggcggcgagcgtccggccgcc
gaggacctggagctggccatccgcccgcaactgacccagcacttcaagccggccctgctc
ggccgtatgcgcgtggtgccctactaccccatggacggcgacctgctgcgccagctggtc
ggtctcaagctggcccgtttcggcgagcgcctggcccgtcgccagctcgccttcagccac
tgcgacggcctggtcgagcacctggccgagcgctgcacccatggcgacagcggcgcccgt
ctgatcgaccacctgatcgaccagcacctgcagccgctggtggtcgaccgcctgctcgac
gccatggcgagcggcgagaccttgcagcaggtacgcgccaccctgaacggtgaaggaacg
gtggtctgtgagttcgcttaa

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