Ectopseudomonas hydrolytica: NLY38_01380
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Entry
NLY38_01380 CDS
T08519
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf00300
Lysine biosynthesis
phf00470
D-Amino acid metabolism
phf01100
Metabolic pathways
phf01110
Biosynthesis of secondary metabolites
phf01120
Microbial metabolism in diverse environments
phf01230
Biosynthesis of amino acids
Module
phf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NLY38_01380 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NLY38_01380 (dapF)
Enzymes [BR:
phf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NLY38_01380 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UTH31989
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Position
complement(278245..279075)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLISQHAHVQPKHAKQWGDRHTGVGFDQLLIVEPPSHPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKKTIRVETKSGVIELRVQNDGQVCVNM
GAPRLEPAQVPFQAEQAALTYRVDVEGQSVELAALSMGNPHAVLRVDNVDSAPVHTLGPK
LEHHPRFPQRVNVGFLQVLDRKHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPV
QLELPGGKLSIEWAGEGQPVMMTGPAARVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctattgcgctttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
atcagtcagcatgcccacgtgcaacccaaacatgccaagcagtggggcgaccgtcacacc
ggcgtcggcttcgatcagttgctgatcgtcgaaccgccgagccacccggacgtcgacttc
cgctaccgcatcttcaactccgacggctccgaggtggagcagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccaccaagaagaccattcgcgtcgag
accaagagcggcgtgatcgaactgcgcgtgcagaacgacggccaggtctgcgtcaacatg
ggcgcaccgcgtctggagccggcgcaggtgccgttccaggccgagcaggcggcgctgacc
tatcgcgtcgacgtcgaaggtcagagcgtcgagctggctgcgctgtcgatgggcaacccg
catgccgtgctgcgcgtcgacaacgtcgacagcgccccggtgcacaccctcggaccgaag
ctggaacatcacccgcgctttccgcagcgggtcaacgtcggcttcctgcaggtgctggac
cgcaagcatgcgcgcctgcgcgtgtgggagcgcggcgccggcgaaacccaggcctgcggc
accggcgcctgcgccgccgcggtcgcggcgattcgccagggctggatggattcgcccgtg
caactggaactgccaggcggcaaactgtccatcgaatgggcaggcgaaggtcagccggtt
atgatgaccgggcccgctgcccgcgtatacgaaggacaggttcgcctatga
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