Ectopseudomonas hydrolytica: NLY38_01385
Help
Entry
NLY38_01385 CDS
T08519
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf00300
Lysine biosynthesis
phf00470
D-Amino acid metabolism
phf01100
Metabolic pathways
phf01110
Biosynthesis of secondary metabolites
phf01120
Microbial metabolism in diverse environments
phf01230
Biosynthesis of amino acids
Module
phf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NLY38_01385 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NLY38_01385 (lysA)
Enzymes [BR:
phf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NLY38_01385 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UTH31990
LinkDB
All DBs
Position
complement(279086..280333)
Genome browser
AA seq
415 aa
AA seq
DB search
MEAFTYRDGELFAEGVALSALAQRFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSSGELERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVH
CFNVESSVELERLQKVAAELGLKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEA
VYARAAELPNLEVVGVDCHIGSQLTTLEPFLDALDRLLLLVDRLAARGIHIKHLDLGGGL
GVQYRDEQPPLAGDYIAAVRKRLAGRDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMDVSPVQPRDGEARHYDLVGPICETGDFLAKDRQLVLEEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQAYEVRRRETVQELYAGESLLPA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaagcctttacctaccgcgacggtgagctgttcgcggaaggtgtcgccttgtccgcg
ctggcccagcgcttcggcacacccacctacgtctactcgcgcgcccatatcgaggcgcag
taccgcgcctatgccgatgccctggcgggcatgccgcatctggtctgcttcgcggtcaag
gccaactccaaccttggcgtgctgaacgtcctggcccgcctcggcgccggcttcgacatc
gtctccagcggtgagctggaacgcgtgctggccgccggtggcgagcctagccgcatcgtc
ttctccggcgtcggcaaaagccgcgacgacatgcgccgcgccctcgaagtgggcgtgcac
tgcttcaacgtcgagtccagcgtcgagctggagcgcctgcagaaggtcgccgccgaactg
ggtctgaaggcgccggtgtcgctgcgggtcaacccggacgtggacgccggcacccatccg
tacatttccaccggtctcaaggaaaacaagttcggcatcgacatcgagcaggccgaggcg
gtctacgcccgcgccgccgagctgccgaacctggaggtggtcggcgtcgactgccatatc
ggctcgcagctgaccaccctcgaacccttcctcgatgccctggaccgcctgctgctgctg
gtcgaccggctggccgcccgcggcatccacatcaagcacctggacctgggcggcggcctc
ggcgtgcagtatcgcgacgaacagccaccgctggccggcgattacatcgccgccgtgcgc
aaacgcctggcaggccgcgatctggccctggtgttcgaaccgggccgcttcatcgtggcc
aatgccggcgtgctgctgacccaggtggaatacctcaagcacaccgagcacaaggacttc
gccatcatcgatgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gacgtttcgccggtgcagccgcgtgacggcgaggcgcgccactacgacctggtcgggccg
atctgcgagaccggcgacttcctggccaaggaccgccagctggtgctggaagaaggcgac
ctgctggccgtgcgttcggccggcgcctacggtttcgtcatgagctccaactacaacacc
cgcggccgcgccgccgaggtgctggtggacggcgaacaggcttatgaagtgcgtcgccgc
gagaccgtccaagagctctacgccggcgaaagcctgctgccggcctga
DBGET
integrated database retrieval system