Ectopseudomonas hydrolytica: NLY38_02000
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Entry
NLY38_02000 CDS
T08519
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf00630
Glyoxylate and dicarboxylate metabolism
phf00680
Methane metabolism
phf01100
Metabolic pathways
phf01120
Microbial metabolism in diverse environments
phf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NLY38_02000 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
NLY38_02000 (fdhF)
Enzymes [BR:
phf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
NLY38_02000 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_10
Fer4_21
Fer4_Nqo3
Fer4_9
Fer4_6
Fer4_2
Fer4_4
Fer4_15
Fer4_8
Fer4_16
Fer4_13
Fer4_NDSU1
Motif
Other DBs
NCBI-ProteinID:
UTH32105
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Position
406768..409602
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AA seq
944 aa
AA seq
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MALYRELDYGTPARSGAPVTLEIDGNAITVPAGTSLMRAAQEAGIAVPKLCASDSLEPFG
SCRLCMVEIEGRRGFPASCTTPVEPGMVVRTQSPKLAELRRGTMELYISDHPLDCLTCSA
NGNCELQDMAGVVGLREVRYDPVKTHLAETKDESNPYFSYDPSKCIVCNRCVRACEEVQG
TFALTIDGRGFDSRVAAGQAEDFLDSECVSCGACVNACPTATLMEKSVIELGQAERSVTT
TCAYCGVGCSFNAEVKGNTVVRMVPNKNGHANHGHACVKGRFAWGYATHPDRIKTPMIRD
SIHEPWRSVSWDEAIGYAARRFKEIQAQYGRNAVGGLTSSRCTNEETYLVQKLVRAAFGN
NNVDTCARVCHSPTGYGLKVTLGESAGTQDFDSVLSADVVLVIGANPTDGHPVFGSQLKR
RLREGAKLIVADPRGIDLVRSPHIRAEHHLQLRPGSNVALLNSLGHVIATEGLINEAFVA
ERCERDAFEQWRTFVSEQRNSPEAMEALTGVPAASVRAAARLYATGGNAAIYYGLGVTEH
SQGSSTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVSDPVA
RPQFEAAWGVKLLDEPGLRIPNMLAAAHAGTFKGMYIQGEDPAQSDPDTQHVTDALKAME
CVVIQDLFLNETAKYAHVFLPGASFLEKNGTFTNAERRISPVRKVMPALAGKEDWEVTVA
LSNALGYPMNYKHPSEIMDEIAALTPTFTGVSYAKLDRMGSIQWPCNDEAPEGTPIMHED
AFVRGKGRFVVTEFIPTEERTSRKRPLVLTTGRILSQYNVGAQTRRTANKAWHAEDILEL
HPVDAEDRGIKDGDWVGINSRAGETVMRAKVTERMQPGVVYTTFHHPESGANVITTDNSD
WATNCPEYKVTAVQVRKVEVPSQWQQEFDTFTREQVSLLPVVQL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtatcgtgaactcgactatggcacccctgctcgcagcggtgctccggtaacc
ctggaaatcgacggcaacgccatcaccgtgccggccggtacctcgctgatgcgtgcggct
caggaggccggtatcgccgtgcccaagctgtgcgccagcgacagcctggagccgttcggc
tcgtgccgcctgtgcatggtggaaatcgaaggccgccgcggcttcccggcgtcctgcacc
accccggtggaaccgggcatggtggtgcgcacgcagagcccgaaactggccgaactgcgt
cgcggcaccatggagctgtacatctccgaccatccgctggactgcctgacctgctcggcc
aacggcaactgcgagctgcaggacatggccggtgtggtcggcctgcgcgaggtgcgctac
gacccggtgaagacgcacctggccgagaccaaggacgagtccaacccctatttcagctac
gacccgtccaagtgcatcgtctgcaaccgctgcgtgcgcgcctgcgaggaagtgcagggc
accttcgccctgaccatcgacggccgcggcttcgattctcgcgtggctgccggccaggcc
gaggatttcctcgactccgagtgcgtgtcctgcggcgcctgcgtcaacgcctgcccgacc
gccacgctgatggaaaagtcggtgatcgagctgggccaggccgagcgcagcgtcaccacc
acctgcgcctactgcggcgtcggctgctcgttcaacgccgaggtcaagggcaacaccgtg
gtgcgcatggtgccgaacaagaacggccacgccaaccacggccacgcctgcgtcaagggc
cgcttcgcctggggctacgcgacccacccggaccgcatcaagacgccgatgatccgcgac
agcatccatgagccgtggcgctcggtgagctgggacgaggccatcggctacgccgcccgg
cgcttcaaggagatccaggcgcaatacggccgcaatgcggtcggcggtctgacctcctcg
cgctgcaccaacgaggaaacctacctggtgcagaagctggtgcgcgccgccttcggcaac
aacaacgtcgatacctgcgcccgcgtctgccactcgccgaccggctacggcctgaaggtg
accctcggcgagtccgccggtacccaggatttcgactcggtgctgtccgccgacgtggtg
ctggtgatcggtgccaaccccaccgacggccacccggtgttcggctcgcagctcaagcgc
cgcctgcgcgagggcgccaagctgatcgtcgccgacccgcgcggcatcgacctggtgcgc
agcccgcacatccgcgccgagcatcacctgcagctgcgtccgggcagcaacgtcgccctg
ctcaacagcctgggccatgtgatcgccaccgagggcctgatcaacgaggccttcgtcgcc
gagcgctgcgagcgtgatgccttcgagcaatggcgcaccttcgtcagtgaacagcgcaac
agccccgaggccatggaagccctgaccggcgtaccggccgcttcggtgcgcgctgctgcg
cggctgtacgccaccggcggcaacgcggcgatctactacggcctgggcgtcaccgagcac
agccagggctcctccaccgtgatggcgatcgccaacctggccatggccaccggcaacatc
ggccgtcccggggtgggcgtgaacccgctgcgcggacagaacaacgtgcagggctcctgc
gacatgggctccttcccccacgagctgccgggctaccgccacgtttccgatccggtggcg
cggccgcagttcgaggccgcctggggcgtcaagctgctcgacgagccgggcctgcgcatc
cccaacatgctcgccgcggcgcatgccggcaccttcaagggcatgtacatccagggcgag
gacccggcgcagtccgaccccgacacccagcacgtcaccgatgcactcaaggccatggag
tgcgtggtgatccaggacctgttcctcaacgaaaccgccaagtacgcccacgtattcctg
cctggcgcctccttcctggagaagaacggcaccttcaccaacgccgagcggcgcatctcg
ccggtgcgcaaggtgatgccggcactggccggcaaggaagactgggaagtgaccgtggcg
ttgtccaacgccctcggctacccgatgaactacaagcatccgtccgagatcatggacgag
atcgccgcgctgacgccgaccttcaccggcgtcagctacgccaagctcgaccgcatgggc
agcatccagtggccgtgcaacgacgaggcgccggaaggcacgccgatcatgcacgaggac
gccttcgtgcgtggcaaggggcgcttcgtggtcaccgagttcatccccaccgaggaacgc
acctcgcgcaagcggccgctggtgctcaccaccgggcgcatcctttcgcagtacaacgtc
ggcgcgcagacccggcgtaccgccaacaaggcctggcacgccgaggacatcctcgagctg
cacccggtggacgccgaggatcgcggcatcaaggatggcgactgggtcggcatcaacagc
cgtgccggcgagacggtgatgcgcgccaaggtcaccgagcgcatgcagccgggcgtggtg
tacaccaccttccaccatccggaatccggtgccaacgtgatcaccacggacaactccgac
tgggccaccaactgcccggagtacaaggtcaccgcggtgcaggtgcgcaaggtcgaagtc
ccgtcgcagtggcagcaggagttcgacaccttcacccgcgagcaggtcagcctgctgccg
gtggtgcagctatga
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