Ectopseudomonas hydrolytica: NLY38_02425
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Entry
NLY38_02425 CDS
T08519
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NLY38_02425 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phf02000
]
NLY38_02425 (choW)
Transporters [BR:
phf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
NLY38_02425 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UTH32183
LinkDB
All DBs
Position
complement(506538..507422)
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AA seq
294 aa
AA seq
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MSDKKLDLGSWVNDVVQHLLDNYSGAFDSIGKLVSGFSEGIENLLMLPPAWLLIAIFVGL
GLWRIGMRFAIFTAVAFILIVMTGFWEQTVVTLGLTFSSTLISLLLGIPLGIWAAKSERV
ATIIRPVLDFMQTMPAFVYLIPAAMLFGLGRVPGIIATVIFAMPPAVRLTSLGIRQVNKE
IVEAGQSFGCTSRQLLFKVQLPNAMPSIMAGVNQTIMMALSMVIIASMVGAGGLGNDVLA
SIQRLDIGLGFESGMAVVLLAIILDRITESFGTKQTAKRGVFAWFSGKLQRQSS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaagaaactcgacctgggcagctgggtcaacgacgtggtccagcacctgctg
gacaactacagcggcgccttcgacagcatcggcaagctggtcagcggcttctccgagggt
atcgagaacctgctgatgctgccgccggcctggctgctcatcgccatcttcgtcggcctc
ggcctgtggcgcatcggcatgcgcttcgcgatcttcaccgcggtggccttcatcctcatc
gtcatgaccggcttctgggagcagaccgtggtcaccctcggcctgaccttctcctccacc
ctgatcagtcttctgctgggcatcccgctgggcatctgggcagccaagagcgagcgcgtg
gccaccatcatccggccggtgctcgacttcatgcagaccatgccggccttcgtctacctg
atcccggcggccatgctgttcggtctcggccgcgtccccggcatcatcgccacggtgatc
ttcgccatgccgccggccgtgcgtctgaccagcctggggattcgccaggtgaacaaggaa
atcgtcgaggcgggccagtccttcggctgcaccagccgccagctgctgttcaaggtgcag
ctgcccaacgccatgccgtcgatcatggccggggtcaaccagaccatcatgatggccctg
tcgatggtgatcatcgcctcgatggtgggcgccggcggtctgggcaacgatgtactggcg
agcatccagcgtctggacatcgggctaggcttcgagagtggcatggccgtggtgctgctg
gcgatcatcctcgaccgcatcaccgagagtttcggcaccaagcagaccgccaagcgtggc
gtgttcgcctggttcagcggcaagctgcagcgccagtcctcctaa
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