Ectopseudomonas hydrolytica: NLY38_04885
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Entry
NLY38_04885 CDS
T08519
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NLY38_04885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
phf02022
]
NLY38_04885
02035 Bacterial motility proteins [BR:
phf02035
]
NLY38_04885
Two-component system [BR:
phf02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
NLY38_04885
Bacterial motility proteins [BR:
phf02035
]
Pilus system
Twitching motility proteins
NLY38_04885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_50
AAA_5
AAA_19
Pre_tape_measure
HTH_30
AAA_16
AAA_22
VpsR
cREC_REC
AAA
Motif
Other DBs
NCBI-ProteinID:
UTH32658
LinkDB
All DBs
Position
complement(1068343..1069683)
Genome browser
AA seq
446 aa
AA seq
DB search
MTRQRALIVDDEPDIRELLEITLGRMKLDTRSARNVKEAREWLAREPFDLCLTDMRLPDG
TGLDLVQHIQQRHPQVPVAMITAYGSLDTAINALKAGAFDFVTKPVDLGRLRELVATALR
IRSPEGEGAPVDNRLLGDSPPMKALRKQIQKLARSQAPVYISGESGSGKELVARLIHEQG
PRAEQPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGQQEVVVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVIE
LRVPPLRERREDIAQLAEVMLARLAEGSGLSAAKLQPEALEKLKNYRFPGNVRELENMLE
RAYTLCEDDQISPADLRLADASGPSGETGEASLALIDNLEDYLEGIERKLIMQALEETRW
NRTAAAQRLGLTFRSMRYRLKKLGID
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccagagagccttgatcgtcgacgacgaaccggacatccgcgaactgctggaa
atcaccctcggccggatgaagctggacacgcgcagcgcacgcaacgtcaaggaagcgcgc
gaatggctggcccgcgagccgttcgacctgtgcctgaccgacatgcgcctgcccgacggc
accggcctcgacctggtgcaacacatccagcagcgccacccgcaggtaccggtggcgatg
atcaccgcctacggcagcctggataccgcgatcaacgcgctcaaggccggcgccttcgat
ttcgtcaccaagccggtggatctcggccgcctgcgcgagctggtcgccacggccctgcgc
atccgctcccccgagggcgaaggcgctccggtggacaaccgcctgctcggcgactcgccg
ccgatgaaggcactgcgcaagcagatccagaagctcgcccgcagccaggcgccggtgtat
atcagcggcgagtccggcagcggcaaggaactggtggcgcgtctgatccacgagcagggc
ccgcgcgccgaacagccgttcgtcccggtcaactgcggcgccatcccatcggagctgatg
gagagcgagttcttcggccacaagaaaggcagcttcaccggggccatcgaggacaagcag
ggcctgttccaggctgccaacggcggcaccctgttcctcgacgaagtggccgacctgccg
ctgccgatgcaggtcaagctgctgcgcgccattcaggaaaaggccgtacgcgccgtcggt
ggtcagcaggaagtggtggtcgatgtgcgcatcctctgcgccacccacaaggatctggcc
gccgaggtggccgccgggcgcttccgccaggacctctattaccgcctcaacgtcatcgaa
ctgcgcgtgccaccgctgcgcgaacgccgcgaggacatcgcccaactggccgaggtcatg
ctcgcccgcctggccgagggtagcggtctgagcgccgccaagctgcagcccgaagcgctg
gagaaactgaagaactatcgcttcccgggcaacgtgcgcgagctggagaacatgctcgaa
cgcgcctacaccctgtgcgaggacgaccagatcagccccgccgacctacgcctggccgat
gcgagcggccccagcggcgaaaccggcgaggccagcctggcgctgatcgacaatctggaa
gactatctcgaaggcatcgaacgcaaactgatcatgcaggcgctcgaagaaacccgctgg
aaccgcacggcggcggcccagcgcctgggcctgaccttccgctcgatgcgctatcgattg
aagaagctggggatcgactaa
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