Ectopseudomonas hydrolytica: NLY38_05070
Help
Entry
NLY38_05070 CDS
T08519
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf00550
Peptidoglycan biosynthesis
phf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NLY38_05070 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
phf01003
]
NLY38_05070 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phf01011
]
NLY38_05070 (mrcB)
Enzymes [BR:
phf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NLY38_05070 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NLY38_05070 (mrcB)
Glycosyltransferases [BR:
phf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NLY38_05070 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
phf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NLY38_05070 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
UTH32692
LinkDB
All DBs
Position
1108941..1111259
Genome browser
AA seq
772 aa
AA seq
DB search
MTRKRSPRSSKKSRSSGLRPWLAWGLKLGLVGLVILAGFAVYLDAVVQEKFSGKRWTVPA
KVYARPLELFVGQKLAKDDFLRELDALGYRRESAVKGPGAVSVAGNNIELHSRGFQFYEG
AEPSQYVRVRFSGDFVAGLTQADGSNLAVARLEPLLIGGLYPAHQEDRILIKLDQVPAYL
IDALVAVEDRDYFDHFGVSPKGIARALWINATSGRLVQGGSTLTQQLVKNFYLTNERTLG
RKITEAMMAVLLELHYDKREILEAYMNEVFLGQDGQRAVHGFGLASQYFFSQPVSELKLE
QVALLVGMVKGPTFYNPRRNPERALERRNLVLDLLAEQGSISVEEAAAAKQRPLGVTTRG
SMADSSFPAFLDLVKRQLREDYREQDLTEEGLRIFTSFDPILQLKAEEALAETLKRLAGR
KGVDEVQAGMVVTNPETGEVQALIGSRQPRFAGFNRALDAVRPIGSLIKPAIYLAALERP
SQYTLTSWLEDEPFSIKGQDGQVWTPQNFDRKAHGTIYLYQGLAQSYNLSTAKLGLEIGV
PNVLKTLERLGVERKWPAYPSMLLGAGALTPMEVADMYQTLANGGFNTPLRGIRSVLTAD
GEPLGRYPFQIQQRFDPGAIYLVQNAMQRTMREGTGRSVYNQLPSSLNLAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGPTPLTGATGALQVWAGFMRKADPLPLDMPMPDNVAQA
WVDRQTGLGSASGCPNAVQMPYIRGSEPAPGSACGFQAPVESVMDWVRGWLD
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaaaacgctccccccgctcaagcaagaaatcccgttcctccggcctgcgcccc
tggctcgcctggggcctcaagctcggtctcgtcggcttggtcatcctcgccggttttgcc
gtctatctcgatgccgtggtgcaggagaaattctccggcaagcgctggacggtgccggcc
aaggtctatgcacgtccgctggaactgttcgtcggccagaagctggccaaggacgacttc
ctgcgcgaactggacgccctgggttatcgccgcgagagcgcggtgaaaggcccgggggcg
gtatcggtggcgggcaacaatatcgaactgcacagccgcgggttccagttctacgagggc
gccgagccgtcgcagtatgtgcgggtgcgcttctccggcgatttcgtggcggggctgacg
caggccgatggcagcaatctggccgtggcgcgtctggagcctttgctgatcggtgggctg
tacccggcgcatcaggaagatcgcatcctgatcaagctggatcaggtgccggcctatctc
atcgatgcgctggtggcagtggaagaccgcgactatttcgatcacttcggcgtctcgccc
aagggtatcgcccgtgcgctgtggatcaacgccacctccggtcgcctggtgcagggtggc
agcaccctgacccagcagttggtgaagaacttctacctgaccaacgagcgcacgctcggg
cgcaagatcaccgaagcgatgatggccgtgttgctggagttgcattacgacaagcgcgag
attctcgaggcgtacatgaacgaggtgttcctcggtcaggacggtcaacgcgcggtccac
ggcttcggcctggccagtcagtatttcttcagtcagccggtttccgagctcaagctggaa
caggtcgcattgctggtcggcatggtcaaggggccgaccttctacaacccgaggcgcaac
cccgagcgtgcgctggagcgccgcaatctggtcctcgatctgctggcggagcagggctcg
atcagcgtcgaggaagcggctgcggccaagcagcggccgctgggcgtgaccacgcgcggc
agcatggcggacagttctttcccggcgttcctcgacctggtcaagcgtcagttgcgtgaa
gactatcgagagcaggatctgaccgaggaaggcttgcgcatcttcaccagtttcgacccg
atcctgcagctcaaggccgaagaggcgttggccgagacgctcaagcgcctggccgggcgc
aagggggtggacgaggtgcaggccgggatggtggtgaccaatcccgagaccggtgaggtc
caggcgctgatcggcagcaggcagccgcgctttgccggcttcaaccgcgcgctggatgcg
gtgcggccgatcggctcgctgatcaagccggcgatctacctggcggccctggagcggccg
agccagtacaccctgaccagctggctggaggacgaacccttctccatcaaggggcaggac
gggcaggtctggacgccgcagaacttcgatcgcaaggcacatggcaccatctacctgtac
caaggcctggcccagtcctacaacctgtccacggccaagctcggcctggagatcggcgtg
cccaacgtgctcaagactctcgagcggcttggggtggagcgcaagtggccggcttatccc
tcgatgctgctgggggcgggcgcattgacgccgatggaagtggcggacatgtaccagacc
ctggccaacggcggcttcaacacaccgttgcgtggcattcgtagtgtgctcaccgccgat
ggtgagccgctcgggcgttatcccttccagatccagcagcgcttcgatcccggcgccatc
tacctggtgcagaacgccatgcagcgcaccatgcgcgagggcaccgggcgctcggtctac
aaccagctgcccagttcgctgaatctggccggcaagaccggtaccagcaacgactcgcgc
gacagctggttcgccggtttcagccaggacctgctggctgtggtctggctcggccgtgac
gataacggtccgacacccctgaccggcgccacgggcgccctgcaggtgtgggcgggtttc
atgcgcaaggccgatccgctgccgctggacatgccgatgccggacaacgtcgcccaggcc
tgggtggaccgtcagaccggtctgggctcggcctcggggtgcccgaatgcggtacagatg
ccttatattcgcggcagtgagccggccccgggctccgcctgtggattccaggcaccggtc
gagtcggtgatggactgggtgcgcggctggttggattga
DBGET
integrated database retrieval system
