Ectopseudomonas hydrolytica: NLY38_06040
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Entry
NLY38_06040 CDS
T08519
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
phf
Ectopseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phf03400
]
NLY38_06040
Enzymes [BR:
phf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
NLY38_06040
DNA repair and recombination proteins [BR:
phf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
NLY38_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
UTH32868
LinkDB
All DBs
Position
1304392..1305954
Genome browser
AA seq
520 aa
AA seq
DB search
MSAAPGPADSGTRRLILLLGDQLTPALGALAQIDARHDRVLLAEVMEEASHVPHHPKKIA
LIFSAMRHFAEALRAQGIQVHYLTLDDPDNSGSLPGELQRWTQRLNPAEVHLTECGDWRL
EQSLRHCGVPIHWHQDSRFLCTREAFAAWAKDRKQLRMEFFYREMRRTSGLLLNPDGTPE
GGAWNFDADNRKALPKEVRPPTAWRIEPDAITREVLALVGQRFTEHYGSLEGFDYPVTAE
QAERLWQHFLANGLAEFGDYQDAMADDEPFLFHSRISAALNIGQLDLRRVCAEVEAAYRA
GDVPLNAAEGFIRQLIGWREYVRGIYWLRMPEYAEGNAFGNSRALPEFYWTGRTRMNCMR
QAIGQTLEHAYAHHIQRLMVTGNFALLAGIAPKAICDWYLAVYMDAFDWVELPNTLGMVM
HADGGYLGSKPYCASGQYIKRMSNHCQGCSYKVSESTGEAACPFNALYWHFLMRHRERLE
RNPRMGMVYRNLARMNEARQRALWDWGERLLARLDAGEVL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagcgccggggcctgccgactcgggcacacgccgcctgatcctgctgctgggc
gatcagctcaccccggcactgggcgcgctggcgcagatcgacgcgcggcatgaccgggtg
ttgctggccgaggtgatggaggaggccagtcatgtgccgcatcacccgaagaagatcgca
ctgatcttcagcgccatgcgccatttcgccgaagccctgcgcgcacagggcatccaggtg
cattacttgaccctggacgatcccgacaacagcggctccttgcccggcgaactgcagcgc
tggacgcagcggctgaatcccgccgaagtgcacctgaccgagtgtggcgactggcgcctg
gaacagtcgctacgccactgcggcgtgccgatccactggcatcaggacagccgttttctc
tgcacgcgcgaggccttcgccgcctgggcgaaggatcgcaagcagctgcgcatggagttc
ttctaccgcgagatgcgccgcaccagtggcctgctgctcaatcccgacggcacgcccgaa
ggcggcgcctggaacttcgatgccgacaaccgcaaggcgctgcccaaggaggtgcgccca
cccacggcatggcgcatcgagccggacgccatcacgcgcgaggtgctggcgttggtcggg
cagcgttttaccgagcactacggcagcctggagggtttcgactacccggtgaccgccgag
caggccgagcgtctctggcagcattttctcgccaacggcctggccgagtttggcgattac
caggacgccatggccgatgacgagccgtttctctttcattcacgcatcagcgccgcactg
aacatcggccagctcgatctgcggcgggtctgcgccgaagtcgaggcggcttatcgtgcc
ggcgacgtgccgctgaacgccgccgaaggtttcattcgccaactgatcggctggcgcgaa
tacgtgcggggcatctactggctgcgcatgccggagtacgccgaaggcaacgccttcggc
aattcacgcgcgctgcccgagttctactggaccggccggacgcgcatgaactgcatgcgc
caggccatcggccagaccctggagcatgcctacgcccaccatatccagcggctgatggtc
accggcaacttcgcgctgctggccggcatcgcgcccaaggccatctgcgactggtacctg
gccgtgtacatggacgccttcgactgggtggagctacccaacaccctgggcatggtgatg
cacgccgacggtggctatctcggttccaagccctactgcgccagcggccagtacatcaag
cgcatgtccaaccattgccagggctgcagctacaaggtgagcgagagcaccggggaggcg
gcctgtccgttcaatgcactgtactggcacttcctcatgcgccaccgcgagcggctggag
cgcaacccgcgcatgggcatggtctaccgcaacctggcgcggatgaacgaggccaggcag
cgggcgctgtgggactggggcgagcgcctgctggccaggctcgatgcgggagaggtgttg
tga
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