Ectopseudomonas hydrolytica: NLY38_06400
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Entry
NLY38_06400 CDS
T08519
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NLY38_06400 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phf03400
]
NLY38_06400 (ruvB)
Enzymes [BR:
phf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NLY38_06400 (ruvB)
DNA repair and recombination proteins [BR:
phf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLY38_06400 (ruvB)
RecFOR pathway proteins
NLY38_06400 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
Mg_chelatase
AAA_17
nSTAND3
Sigma54_activat
AAA_16
TIP49
Rad17
ABC_tran
AAA_14
RNA_helicase
AAA_28
Resolvase
AAA_18
TsaE
NTPase_1
NB-ARC
AAA_24
NACHT
RsgA_GTPase
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
UTH32937
LinkDB
All DBs
Position
1381152..1382204
Genome browser
AA seq
350 aa
AA seq
DB search
MIEADRLITASPREREEQQDRAIRPLKLADYIGQPGVREQMELFIQAARGRAESLDHTLI
FGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEAGDVLFVDEIHRLSP
IVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR
LEFYGIDDLATIVTRSAGILGLPIEDQGAYEIARRARGTPRIANRLLRRVRDFAEVRGRG
HITREIADQALNLLDVDERGFDHSDRRLLLAMIEKFDGGPVGVDSLAAAISEERHTIEDV
LEPYLIQQGYMMRTPRGRVVTRHAYLHFGLNTPKRLGEQPSGDLFAVSDE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagccgatcgcctgattaccgccagcccgcgcgagcgcgaagagcagcaggat
cgagccatccgtccgctgaagctggccgactacattggccagcccggcgtgcgcgagcag
atggagctgttcatccaggccgcccgtggccgggcggagtcgctcgatcacaccctgatc
ttcggtccgcctggtctgggcaagaccaccctggccaatatcatcgcccaggaaatgggc
gtatcgatcaagagcacgtccggccctgtattggagcgtccgggcgatctggctgccctg
ttgaccaatctggaagccggggacgtgctgttcgtcgacgaaatccaccgtctctcgccg
atagtcgaggaggtgctgtatccggccatggaggacttccagctcgacatcatgatcggc
gaaggcccggcggcgcgctcgatcaagctcgacttgccgcccttcaccctggtgggcgcc
actacccgcgccggcatgctgaccaacccgctgcgcgaccgcttcggcatcgtccagcgc
ctggagttctacggtatcgacgacctggctaccatcgtcacgcgatccgccggcattctc
ggcctgcccatcgaagaccagggcgcttacgagatcgcgcgtcgtgcgcgcggcacgccg
cgtatcgccaaccgcctgctgcgccgcgtgcgcgacttcgccgaagtgcgcgggcgtggc
cacatcacccgtgagatcgccgaccaggcgctcaacctgctggatgtcgatgaacgtggc
ttcgaccactccgaccgtcgtctgctgttggccatgatcgagaagttcgacggtggaccg
gtgggcgtcgacagcctggcggccgccatcagcgaagagcgccacaccatcgaggatgtg
ctcgaaccctatctgatccagcagggctatatgatgcgtacgccgcgcgggcgggtggtg
acccgtcacgcctatctgcactttggcctcaacaccccaaaacgtctcggcgagcagccg
agcggagacttgttcgcagtgagcgacgaatga
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