Ectopseudomonas hydrolytica: NLY38_07850
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Entry
NLY38_07850 CDS
T08519
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf00061
Fatty acid biosynthesis
phf00071
Fatty acid degradation
phf01100
Metabolic pathways
phf01212
Fatty acid metabolism
phf02024
Quorum sensing
phf04146
Peroxisome
Module
phf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NLY38_07850
00071 Fatty acid degradation
NLY38_07850
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NLY38_07850
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLY38_07850
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phf01004
]
NLY38_07850
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phf04147
]
NLY38_07850
Enzymes [BR:
phf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NLY38_07850
Lipid biosynthesis proteins [BR:
phf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NLY38_07850
Exosome [BR:
phf04147
]
Exosomal proteins
Exosomal proteins of breast milk
NLY38_07850
Exosomal proteins of breast cancer cells
NLY38_07850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF6391
Motif
Other DBs
NCBI-ProteinID:
UTH33211
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All DBs
Position
1678137..1679777
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AA seq
546 aa
AA seq
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MTLQLPLQHFNHWLDRQPDAVWLRQPVAGLWHDFTWRQVDEQARRLASALQALGCVPGER
VALLAKNCAEWFISDLAIQHAGLVSVPLYPLQAPEQIAYVLEHAGCKLILVGKLDEPDKL
AGGIAAHIPRIAMPYPTMPAEHQWHALLAAHEPLQGNRSQRGEDLLSILYTSGTTGQPKG
VMLSAHAMAFSAANATAEMRMTPQDQFFSYLPLSHAAERFLVEFNSLYCGAPVAFVESLE
TFASDLRQVRPTVFFSVPRLWTRFQQGVLEKLPAQRLERLLRIPLLGRLVARKVRAGLGL
DRARILVSGAAAISTGLLEWYRRLGMTLCEGYGMTEHFAYGCFNRPGQVRFGTVGRPMPH
LQLRIDDSGEILLRSETLMQGYYREPEKTAETLKDGWLHTGDRGQLDEAGYLRITGRVKD
IFKTSKGKYVAPAPIEGEIAKSHWVEQVCLMGSNLDQPLALIELSPAARQQPREAVSEAL
QQHLQAINQRLAVHERISHFILVHEAWTVDNGCMTPTMKIRRNVLEARYAEAIASLSASD
AIVWER
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcaactgcctctgcaacatttcaaccactggctggaccggcagcccgatgcc
gtctggctgcgccaaccggtggcgggcctctggcacgacttcacctggcgtcaggtcgac
gagcaggcccggcgtctggccagtgcgctgcaggcgttgggctgcgtgcccggcgagcgg
gtcgcgctgctggcgaagaactgcgccgaatggttcatcagcgacctggccatccagcat
gccgggctggtcagcgtgccgctgtatccgctgcaggctcccgagcagatcgcctatgtg
ctggaacatgccggctgcaagctgattctggtgggcaagctggacgagccggacaagctg
gccgggggaatcgcggcgcatattccccgcatcgccatgccatacccgaccatgcctgcc
gagcaccagtggcacgcgctgctggccgctcacgagccgctgcagggcaaccgctcgcag
cgcggcgaagatctgctgtcgatcctctatacctccggcaccaccgggcaacccaagggc
gtgatgctctcggcccatgccatggccttctccgcggcgaacgccacggcggagatgcgc
atgacgccgcaggatcagttcttctcctatctgccgctatcgcatgccgccgagcgtttt
ctggtggagttcaacagcctctactgcggagcgccggtggccttcgtcgagtcgctggag
accttcgccagcgaccttcgccaggtgcggcccaccgtgttcttctccgtgccgcggctg
tggacgcgctttcagcagggcgtgctggagaaactgccggcgcaacggctcgagcgcttg
ctgcgcattccgttgctcggtcgcctggtggcgcgcaaggtgcgggccgggctggggctg
gatcgcgcgcgcattctggtctccggcgcggcggcgatttccaccgggctgctggagtgg
tatcgacgtctgggcatgaccctctgcgagggctacggcatgaccgagcatttcgcctac
ggctgtttcaaccgtccggggcaggtgcgcttcggcaccgtgggccggccgatgccgcac
ctgcagctacgcatcgatgacagcggcgagattctgctgcgcagcgagacgctgatgcag
ggctattaccgcgagccggaaaagaccgccgaaacgctcaaggatggctggctgcacact
ggcgatcgcggtcagctggacgaggcgggctatctgcgcatcaccggacgggtcaaggac
atcttcaagaccagcaagggcaagtacgtggcgccggcgcccatcgagggcgagatcgcc
aagagccactgggtcgagcaggtatgcctgatgggcagcaacctggatcagccgctggcg
ctgatcgaactgtcacccgcggcccgccagcaaccccgggaagccgtgagcgaggcgctg
cagcaacatctgcaggcaatcaaccagcgcctggcggtgcatgagcgcatcagtcatttc
atcctggtgcacgaggcctggacggtggacaacggctgcatgacgccgaccatgaagatt
cgtcgcaacgttctcgaggcgcgctatgccgaagccattgccagcctgtcggcgagcgac
gccatcgtctgggagcgttga
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