Ectopseudomonas hydrolytica: NLY38_09095
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Entry
NLY38_09095 CDS
T08519
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
phf
Ectopseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phf03032
]
NLY38_09095
03400 DNA repair and recombination proteins [BR:
phf03400
]
NLY38_09095
Enzymes [BR:
phf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NLY38_09095
DNA replication proteins [BR:
phf03032
]
Prokaryotic type
DNA Topoisomerases
NLY38_09095
DNA repair and recombination proteins [BR:
phf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NLY38_09095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Acetyltransf_5
Motif
Other DBs
NCBI-ProteinID:
UTH33437
LinkDB
All DBs
Position
complement(1976172..1977197)
Genome browser
AA seq
341 aa
AA seq
DB search
MSLAPGDIELPADLRYVDDSMPGISRRKLRGKFCYFDTQGQRIRDPKEVARINALAVPPA
YTDVWICPLANGHLQATGRDARGRKQYRYHARWREIRDADKYASLLAFGKALPALREALQ
QHLNLREHRREKVLATVIMLLDNTLIRVGNARYARDNRSYGLTTLRNRHVEVQGSTIRFH
FRGKSGIEHEVQVSDRRLARIIQRCLELPGQHLFQYLDEHGERRAVTSTDINEYLRELTG
ADFTAKHYRTWAGSALALTLLRELEWQPESAAKKHMVAMVKEVAQQLRNTPAVCRKCYIH
PALIDAFLAGELAGLRLAPSRKGLRAEESLLMRFLEKLPPA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggcgcctggcgatatcgaactaccggccgacctgcgctatgtcgacgacagc
atgcccggcatcagccgccgcaagctgcgcggcaagttctgctacttcgacacgcagggc
caacgcatccgtgaccccaaggaggtggcccgcatcaatgccctggcagtgccgcccgcc
tacaccgacgtctggatctgcccactggccaacggtcatctgcaggcaaccggccgcgat
gcccgcgggcgcaagcaataccgttaccacgcccgctggcgcgaaatccgcgatgcggac
aagtacgccagcctgctggcattcggcaaagccctgccggcgctgcgcgaagcgctgcag
cagcacctgaacctgcgcgaacatcgccgcgagaaagtgctggcaacggtgatcatgctg
ctggacaacaccctgatccgggtcggcaacgcccgctacgcgcgggacaatcgctcctat
gggctgaccaccctgcgcaaccgtcacgtcgaggtgcaaggcagcaccatacgctttcac
tttcgcggcaagagcggcatcgagcacgaggtgcaggtcagcgaccgacgcctggcgcgc
atcatccagcgctgtctggaactgcccggacaacacctgttccagtatctggacgagcat
ggcgagcgtcgcgcggtgacctccaccgatatcaacgagtacctgcgtgaactcaccggc
gccgacttcaccgccaagcactaccgcacctgggccggcagcgcgctggccctgacgcta
ttgcgcgagctcgaatggcagccggaaagcgcagccaagaagcatatggtggccatggtc
aaggaggtggcgcagcagctgcgtaatacgccggcggtctgccgcaagtgctacatccat
ccggccctgatcgacgccttcctcgctggcgagctggccggcctccgcctggcgccgtcg
cgcaagggcctgcgcgccgaagaaagcctgctgatgcgctttctggaaaagctgccgccc
gcctga
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