Pseudomonas hydrolytica: NLY38_09230
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Entry
NLY38_09230 CDS
T08519
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
phf
Pseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phf03036
]
NLY38_09230 (smc)
Chromosome and associated proteins [BR:
phf03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
NLY38_09230 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
DUF4763
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UTH33464
LinkDB
All DBs
Position
2009958..2013446
Genome browser
AA seq
1162 aa
AA seq
DB search
MRLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSNTRKPVTQASIELIFDNSDNSLVGEYAAFAEISIRRRVTRDGQNTYFLNGT
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEELRNFIEEAAGISKYKERRRET
ENRIRRTQENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLLALRWQTL
NQQVGSREQVIGDQEVAFEALVAEQRSADAAIERLRDGHHELSERFNLVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLREAEKARLETESHLGHDRTLLATLGEELEMLLPEQELTA
AAAEESAAGLEEAEAAMHGWQEQWDGFNQRSAEPRRQAEVQQSRIAQLEQSLERLAERQR
RLNEELQQLAADPEDAAILELNEQLAAGELEHEALQLAEEQQAERLQQLREELQQAGQAQ
QQAQGELQRLNGRLASLEALQQAALDPGQGAGDWLREQGLLQRPRLAEGLRVEAGWELAV
EAVLGADLQAVLLDDFAGLDFTTLEQGELRLASLGTAGGRRAGSLLDKIESSHDLSPWLA
SVRPVESLEQALAARAQLADGESLISRDGYWVGRHFLRVRRAAEADSGVLARGQELERLQ
LEREEREAALAQLDERLLALRDEQRRQEELREQQRRQGQELARQLSELKARLSASQAKAE
QLGLRRRRLQDELQEAAEQREIEQEQLGEARLQLQDALDAMALDNEQRESLLASRDSLRE
RLDRVRQEARQHKDHAHQLAVRVGSLKAQHDSTRQALERLEMQAERLHERREQLSLNLEE
GEAPLEELRIKLEELLERRMAVDEELRQARLALEDADRELRDAEKRRTQAEQQAQMLRSQ
LEQQRMDWQSLNVRRKALADQLAEDNYDLHGVITTLPAEASESAWEEELERMAARIARLG
PINLAAIDEYQQQSERKRYLDAQDADLVEALETLENVIRKIDKETRNRFKDTFDQINGGL
QALFPKVFGGGNAYLELTGEDLLDTGVTIMARPPGKKNSTIHLLSGGEKALTALALVFSI
FQLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSATVQFIYITHNKIAMEMADQLMGVTM
HEPGCSRLVAVDVEEALAMVES
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgaaaagcatcaagctggccggcttcaagtccttcgtcgatccgacgacggtg
agctttcccagcaacatggcggcggtggtcgggcccaacggttgcggcaagtccaacatc
atcgacgccgttcgctgggtgatgggtgaaagttcggcgaagaacctccgtggcgagtcg
atgaccgacgtcatcttcaacggctccaacacgcgcaagccggtgacccaggcctccatc
gagctgatcttcgacaacagcgacaactcgctggtgggcgaatacgccgccttcgccgag
atttccatccgccgccgggtgactcgcgacgggcagaacacctatttcctcaacggcacc
aagtgccgtcgccgcgatatcaccgatatcttcctcggcaccggcctggggccgcgcagc
tactcgatcatcgagcagggcatgatcagcaagctgatcgaggccaagcccgaggagctg
cgcaatttcatcgaggaagccgccggcatctccaagtacaaggagcgccgccgcgagacc
gagaaccgcatccgccgcacccaggagaacctggcgcgtctgaccgatctgcgcgaggag
ctggagcgccagctcgaacgtctgcaccgtcaggcccaggcggcggagaagtaccaggaa
tacaaggccgaggagcgtcagctcaaggcccaactgctggccctgcgctggcagaccctg
aaccagcaggtcggcagccgcgagcaggtgatcggcgaccaggaagtggctttcgaagca
ttggtggccgagcagcgcagtgccgatgccgccatcgagcgcctgcgcgacggccatcat
gaactctccgagcgtttcaatctggtgcaggggcgcttctattccgtgggtggcgatatc
gcccgcgtcgagcagagcatccagcatggccagcagcgcctgcgccagttgcaggacgac
ctgcgcgaggcggaaaaggcgcgcctggaaaccgaatcgcacctcggccatgaccgcacc
ctgctggccactctgggcgaagaactcgagatgctcctgcccgagcaggagctgactgcc
gccgctgccgaggaatccgccgccggcctggaagaggccgaggccgccatgcatggctgg
caggagcagtgggatggtttcaaccagcgcagcgccgagccgcgtcgccaggccgaggtg
cagcagtcgcgcatcgcccagctggagcagagcctggagcgcctggccgaacgccagcgc
cgactcaacgaagagctgcagcaattggcggccgaccccgaagacgccgccattctcgaa
ctgaacgaacagctcgccgccggcgagctggagcacgaagccctgcagctggccgaagag
cagcaggccgagcgcctgcagcaactgcgcgaggaactgcagcaggccggccaggcgcag
cagcaggctcagggtgagctgcagcggctgaacggccgtctggcgtcactggaggccctg
cagcaggccgcgctcgatcccgggcagggcgcaggcgactggctgcgcgagcagggcctg
ctgcagcgtccgcgcctggccgaagggctgcgtgtggaggccggctgggagctggcggtg
gaagccgtgctcggcgctgacctgcaggcggtgctgttggacgatttcgccgggctggat
ttcaccacactggagcagggcgaactgcgcctggccagcctcggcaccgctggtggccgt
cgcgccggcagcctgctggacaagatcgagtcgagccatgatctgtcgccctggctggcc
agtgtgcgcccggtggagtcgctggagcaggctctggcggctcgcgcgcagttggccgat
ggcgaaagcctgatcagccgcgacggctactgggtcggccggcatttcctgcgcgtgcgt
cgcgccgccgaggcggacagcggcgtgctggcgcgcggccaggagctggaacgcctacag
cttgagcgcgaagagcgcgaagcggccctggcgcaactggatgaacgcctgctggcgctg
cgcgacgagcagcgccgtcaggaggagctgcgcgagcagcaacgccgtcagggccaggaa
ctggcgcgccagttgagcgagctgaaggcgcgcctgtccgccagtcaggccaaggccgag
cagctgggcctgcgtcgccgccgtctgcaggacgaactgcaggaagccgccgagcagcgc
gagatcgagcaggagcaactgggcgaagcgcgcctgcagttgcaggacgcactggacgcc
atggcgctggacaacgagcagcgcgaaagcctgctggccagccgcgacagcctgcgcgag
cgcctcgaccgtgtgcgccaggaagcgcgtcagcacaaggatcacgctcaccagctggcg
gtacgggtcggttcgctcaaggcgcagcacgactccacccgccaggcgctggagcgtctg
gagatgcaggccgagcgcctgcacgagcggcgcgagcaactgtcgctgaacctggaagag
ggcgaggcgccgctggaagagctacgcatcaagctcgaagaactgctcgagcggcgcatg
gctgtggacgaggaactgcgccaggcgcgcctggcgctggaagatgccgaccgcgaactg
cgcgatgccgagaaacgccgtacccaggccgagcagcaggcgcagatgctgcgcagccag
ctcgagcagcagcgcatggactggcagtcgctcaacgtgcggcgcaaggccctggccgat
cagctcgccgaggacaattacgacctgcatggggtgatcaccaccttgccggccgaggcc
tcggaaagcgcctgggaagaagagctggagcgcatggctgcacgcatcgcccggctcggg
ccgatcaacctggcggccatcgacgagtatcagcagcagtccgagcgcaagcgctacctg
gatgcgcaggacgccgacctggtcgaggccctggaaaccctggaaaacgtcatccgcaag
atcgacaaggaaacgcgcaatcgtttcaaggacaccttcgatcagatcaatggcggtttg
caggcactctttccaaaagttttcggtggcggcaacgcttatttggaactcaccggcgaa
gatttactcgataccggtgtaaccatcatggcgcggcccccgggcaagaagaacagcacc
attcatttgctctccggtggagagaaagcgctgacggcgttggcgctggtgttttccatc
ttccagctcaatccggcgccgttctgcatgttggatgaagtggatgcgccgctggacgac
gccaacgtgggtcgctatgcgcgtctggttaaggagatgtcggcgacggtgcagttcatc
tacatcacccacaacaagatcgccatggaaatggccgatcaactgatgggggtcaccatg
cacgagccgggctgttcgcggctggtggcggtggatgtcgaagaggcgctggcgatggtg
gagagctga
DBGET
integrated database retrieval system
