Ectopseudomonas hydrolytica: NLY38_10675
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Entry
NLY38_10675 CDS
T08519
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf00061
Fatty acid biosynthesis
phf00071
Fatty acid degradation
phf01100
Metabolic pathways
phf01212
Fatty acid metabolism
phf02024
Quorum sensing
phf04146
Peroxisome
Module
phf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NLY38_10675
00071 Fatty acid degradation
NLY38_10675
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NLY38_10675
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLY38_10675
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
phf01004
]
NLY38_10675
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phf04147
]
NLY38_10675
Enzymes [BR:
phf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NLY38_10675
Lipid biosynthesis proteins [BR:
phf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NLY38_10675
Exosome [BR:
phf04147
]
Exosomal proteins
Exosomal proteins of breast milk
NLY38_10675
Exosomal proteins of breast cancer cells
NLY38_10675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UTH33740
LinkDB
All DBs
Position
2300837..2302504
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AA seq
555 aa
AA seq
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MADAIRLPLELFYEREARHPNKRYMVQPLGGGKLLELSWGDVGEQARRAANWLRSRELPQ
GSRIAIVSKNCAHWIIADLAIWMAGHVSVPLYPNLTADSMRQVLEHSEAALAFIGKLDDW
QAMAPGLPQGLPTVSLPLHPQGQFDFSWDDLQRCAPIQDDPKPAADQLATIIYTSGTTGA
PKGVMHNFSNFGFAASNAIALFGVGEDDRLISYLPLCHVAERMFVELASLYAGQTIFFAE
SLDTFLDDLKRARPTVMFGVPRIWTKFQMGVYGKMPAHKLDRLLKLPIIGRIVGRKVLAG
LGLDAIRYALSGAAPVPEALLNWYRRLGMEIQEVYGMTENCGYSHVCRPGKFKQGWIGQN
NPGVEVRIAEDGEVQVRSGATMQGYYKDPVKTAEALTADGFLRTGDKGEQDAEGNLRLTG
RIKEIFKTSKGKYVAPAPIENRIGEHSRIEQVCVVGDGLPQPIALCVLSDVGRQEAANDG
RAELESSLKALVEQVNDRLDHHERLQGLVLVREVWAVENGFLTPTLKIKRAVIEGTYGER
FAEWQQRSEVVLWHD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatgcaatccgtttgccgctcgagctgttctacgaacgtgaagcaaggcacccg
aacaaacgctacatggtgcaacccctgggcggcggaaagctgctggagctgagctggggc
gatgtgggggagcaggcgcgccgagccgccaactggctgcgtagccgcgaattaccgcag
ggcagccgtatcgccatcgtctcgaagaactgcgcgcactggatcatcgccgacctggcg
atctggatggccggccacgtatcggtaccgctctatcccaacctgaccgccgactccatg
cggcaggtgctggagcattccgaggcggcgctggcattcatcggcaagctcgacgactgg
caggccatggccccggggctgccacaagggctgccgaccgtcagcctgccgctgcatcct
cagggccagttcgacttcagctgggacgatctgcagcgctgcgcgccgatccaggacgac
cccaagcccgcggccgatcagctggccaccatcatctacacctccggcaccaccggcgcg
ccgaaaggggtgatgcacaacttctccaacttcggcttcgccgccagcaacgccatcgcg
ctgttcggcgtgggcgaggatgaccgcctgatctcctacctgccgttgtgccacgtggcc
gagcgcatgttcgtcgagctggcgtcgctgtatgccgggcagacgatctttttcgccgaa
agcctggacaccttcctcgacgacctcaagcgtgcccggccgaccgtaatgttcggcgta
ccgcggatctggaccaagttccagatgggggtgtacggcaagatgccggcgcacaagctc
gaccgtctgctcaagctgccgataatcggccgcatcgtcgggcgcaaggtgctcgccggc
ctcgggctggacgccattcgctatgcgctgtccggcgccgccccggtgcccgaggcgttg
cttaactggtaccggcgcctgggcatggagatccaggaggtctatggcatgaccgagaac
tgcggttactcccatgtctgccggcccggcaagttcaagcagggctggatcggccagaac
aaccccggtgtcgaggtgcgtatcgccgaggatggcgaagtccaggtgcgcagtggcgcc
accatgcagggctactacaaagacccggtcaagaccgccgaggcgctgaccgccgacggc
ttcctgcgtaccggcgacaagggcgagcaggacgccgagggcaatctgcgcctgaccgga
cggatcaaggaaatcttcaagaccagcaagggcaagtacgtggcgccggcgccgatcgag
aaccgcatcggcgagcattcgcgcatcgagcaggtctgcgtggtgggcgacggcttgccc
cagccgatcgcgctgtgcgtgctgtccgacgtggggcgccaggaggcggccaacgacggt
cgtgccgagctggagagcagcctcaaggcgctggtggagcaggtcaatgaccgcctcgat
catcatgagcgtctgcaggggctggtgctggtccgcgaggtctgggcggtggaaaacggc
tttctcacacccacgctgaagatcaagcgcgccgtaatcgaaggtacctacggcgagcgt
ttcgccgaatggcagcagcgcagcgaagtggtgctctggcacgattga
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