KEGG   Pseudomonas hydrolytica: NLY38_12230
Entry
NLY38_12230       CDS       T08519                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
phf  Pseudomonas hydrolytica
Pathway
phf02025  Biofilm formation - Pseudomonas aeruginosa
phf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:phf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NLY38_12230
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    NLY38_12230
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phf02044]
    NLY38_12230
Secretion system [BR:phf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NLY38_12230
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: UTH34025
LinkDB
Position
complement(2632002..2632490)
AA seq 162 aa
MAVDMFIKIGDLEGESADKTHGKEIDVLAWSWGMSQSGNMHQGGGGGAGKVSIQDISITK
WIDKSSPNLMMACSNGKHFPEAKLTVRKAGGESPVEYLIITLKEVLVSSVSTGGSGGEDR
LTENVSLNFAQVLVDYQPQKADGAKDGGPVKYGWNIRENVKV
NT seq 489 nt   +upstreamnt  +downstreamnt
atggctgttgatatgttcatcaagatcggcgatctcgaaggcgaatccgccgacaagacc
cacggaaaggaaatcgacgtactggcatggagctggggcatgtcgcagagcggcaacatg
caccagggcggtggtggcggtgccggcaaggtcagcattcaggacatctcgatcaccaag
tggatcgacaagtcctcacccaacctgatgatggcgtgctccaacggcaagcacttcccg
gaagccaagctgacggtgcgcaaggccggcggcgaatcgccggtggagtacctgatcatc
accctcaaggaagtcctggtgtcctccgtcagcaccggcggcagcggtggcgaggatcgc
ctgaccgagaacgtctcgctcaacttcgcccaggtgctggtcgactaccagccgcagaaa
gccgatggcgccaaggatggaggcccggtcaagtacggctggaacatccgcgagaacgtc
aaggtatga

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