KEGG   Ectopseudomonas hydrolytica: NLY38_12235
Entry
NLY38_12235       CDS       T08519                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
phf  Ectopseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:phf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phf02044]
    NLY38_12235 (tssC)
Secretion system [BR:phf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NLY38_12235 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 BMFP
Other DBs
NCBI-ProteinID: UTH34026
LinkDB
Position
complement(2632567..2634063)
AA seq 498 aa
MAETMTEQQAQAGTATAEGGDFAALLLQEFKPKTERAREAVETAVRTLAEHALAKTDLIS
NDAIKSIESIIAAIDAKLTEQINLIMHHQDFQQLESAWRGLSYLVNNTETDEQLKIRVMS
ISKGELHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLT
ELSKVCAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAAWRSLRESEDARYI
GLTMPRFLARLPYGAKTDPVDAFAFEEDTSGADSSKYTWANSAYAMAVNINRSFKLYGWC
SRIRGVESGGEVTNLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTD
LAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDD
MQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVEEIEGNPGYYSSKFFLRPHYQLE
GLTVSLRLVSKLPSAKGA
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggccgagacgatgaccgaacagcaggcccaggccgggactgctaccgcagaaggcggc
gacttcgccgccctcctcctgcaggaattcaaacccaagaccgagcgcgcccgcgaggcg
gtggaaaccgcagtgcgcaccctggccgaacatgcgctggcaaagaccgacctgatctcc
aacgatgcgatcaagtccatcgagtcgatcatcgcggccatcgacgccaagctcaccgag
cagatcaacctgatcatgcaccaccaggacttccagcaactggagagcgcctggcgcggg
ctgagctacctggtcaacaacaccgagaccgacgagcagctgaagatccgcgtgatgagc
atctccaagggcgagctgcacaagaccctgaagaagttcaagggcaccgcctgggaccag
agcccgatcttcaagaagatgtacgaagaggaatacggccagttcggcggcgagccctac
ggctgtctggtcggcgattactacttcgaccagtcgccaccggacgtggaactgctcacc
gaactgtccaaggtctgcgcggccatgcacgcgccgttcatttcggcggcatcgcccacg
gtcatgggcatgggctcctggcaggagctgtccaacccgcgtgacctgaccaagatcttc
accacccccgaatacgccgcctggcgctcgctgcgcgagtccgaggatgcccgctacatc
ggcctgaccatgccgcgcttcctcgcccgcctgccttacggggccaagaccgatccggtc
gatgcctttgccttcgaggaggacaccagcggcgccgacagcagcaagtacacctgggcc
aactcggcctacgccatggcggtgaacatcaaccgctcgttcaagctctacggctggtgc
tcgcgcatccgcggcgtggagtccggcggcgaggtgaccaacctgcccgcccacaccttt
cccaccgacgatggtggcgtggacatgaagtgccccaccgagatcgccatttccgaccgc
cgcgaggccgagctggcgaagaacggcttcatgcccctgctgcacaagaagaacacggac
ctggccgcgttcatcggtgcgcagtcgttgcagaagccggccgagtacgacgaccccgac
gcaacggccaacgccaacctcgccgcgcgtctgccctacctgttcgccacctgccgcttc
gcgcattacctgaaatgcatcgttcgcgacaagatcggctcgttcaaggagaaggacgac
atgcagcgctggctgcaggactggatcctcaactacgtcgatggcgatcccgcccactcc
accgagaccaccaaggcgcaacacccgctggcggcggccgaggtggtggtcgaggaaatc
gaaggcaaccccgggtactacagctcgaagttcttcctgcggccgcattaccagctggaa
gggctcaccgtgtcgttgcgcctggtgtcgaaactgccctcggccaagggcgcttga

DBGET integrated database retrieval system