KEGG   Ectopseudomonas hydrolytica: NLY38_12270
Entry
NLY38_12270       CDS       T08519                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
phf  Ectopseudomonas hydrolytica
Pathway
phf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:phf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NLY38_12270 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phf02044]
    NLY38_12270 (tssM)
Secretion system [BR:phf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NLY38_12270 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical RHH_1 Rad17
Other DBs
NCBI-ProteinID: UTH34033
LinkDB
Position
2640760..2644275
AA seq 1171 aa
MKAFFNFCVRWLVPILGLIALSLVIWFVGPLIAIGGFEPLASATVRWILIALLFLTWIGF
RVLRLIQARRNAAKVMQGLVAVAPDAASVATAEELATLKQRMDEALQLLKKAKLGGQERR
NLYELPWYVIIGPPGSGKTTALVNSGLNFPLAEHMGGGAIRGVGGTRNCDWWFTDEAVLL
DTAGRYTTQDSHAEVDKAAWLGFLDLLKNQRKRRPIDGAFIAISLSDLLLGSESERAAHA
RSIRARVQELYAQLGVRFPIYVMLTKFDLVPGFMEFFDDLGKEERAQVWGTTFPLDDGKS
GEGPLAGFKQEFAALEERLTQRLVERLQQERDPNRRDLIYGFPQQFAALRDNLASFLDGV
FKPNPYEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQTGTGRSYFIERL
FREVAFGERGLVGANPKVERRRKWITRGALAASVLLFVAVASVWLVSYNANQAYIAEVDA
RVAPLKGQLEALSPAQREVLAVLPLLNAIRHVADNPPSWAAGFGLYQGDMLGAEAGSVYR
KLLIAVMAPRLLTRIEEQLRSGGNSDFLYEGLKAYLMLASADQYDADFIKAWINLDWDQS
LPRDLAPDQRLALGEHLDALFARKPPPARLDENLIEDLRRQLQQMSVAQRVYNRVKRQKL
PDGLPDFRISEAAGRDAALVFTRKSGKPLNDPLSGFYTYRGYRQVFMVASLSQSGALAEE
QWVLGRPLADNQDAASLALEVRNLYFQDFLGQWESLLGDIDFVAITSVAQAADVMRVLSG
PNSPLKQLLEAVARETDLQQEDRLLADKLKAADGTVDKLKQQLGSLVGQGAQNQPQAAPQ
VDPITARFNELNSLVRKPEGSNSAPIDDLLAQFNELYVQLSAMSGASGDALLGEAKNQAV
ASAQRVKLAGERQPPLVQNLVNSVVSATTNSMMGGIRSQLNAAWVAEVVNVYRQSLAGRY
PLDSGSTRDATLEDFGNFFGVGGVMDNYFRKYLQPYVDTSATTWRWQPGAAERLGIGSGV
LQTFQRAAAIRDAFFRSGGTQPTVRFELKPVAMDAAISQFILDLDGQQMTYDHGPSRPVA
MQWPSPNSLGVVRLSITPPTSAGRSGLTLDGPWAWFRLLEQSDLTPGASPDRFTLRLRVD
NASVACELRASSAFNPFRGRVLSGFSLPERL
NT seq 3516 nt   +upstreamnt  +downstreamnt
gtgaaggccttcttcaatttctgtgtgcgctggctggtgccgattctcggtctgatcgcc
ctcagcctggtgatctggttcgtcggcccgctgatcgccatcggcggcttcgagccgctg
gcctcggcgaccgtacgctggattctgatcgcgctgctgttcctgacctggattggcttt
cgcgtcctgcgcctgatccaggcgcggcgcaatgccgccaaggtcatgcaggggctggtg
gcggtggcgccggatgccgccagcgtggccaccgccgaggagctggcgaccctcaagcag
cgcatggacgaagccctgcaattgctgaagaaggccaagctaggtggccaggagcggcgc
aatctctacgagctgccctggtacgtgatcatcggtccgcccggttcgggcaagaccacc
gcgctggtcaactccgggctcaacttcccgctggccgagcacatgggcggtggcgccatt
cgcggcgtcggcggcacacgcaactgcgactggtggttcaccgacgaggccgtgctgctg
gataccgccgggcgctacaccacccaggacagccacgccgaggtggacaaggccgcctgg
ctgggctttctcgacctgctcaagaaccagcgtaagcgccgccccatcgacggcgcgttc
atcgccatcagcctgtccgatctgctgctgggcagcgagagcgagcgcgccgcccatgcc
cgttccatccgtgcgcgggtgcaggagctctacgcccagctcggcgtgcgtttcccgatc
tacgtgatgctgaccaagttcgacctggtgcccggcttcatggagttcttcgacgacctc
ggcaaggaggagcgcgctcaggtctggggcaccaccttccccctggacgacggcaagagc
ggagaagggccgctggctggcttcaagcaggagttcgccgcgctcgaggagcgcctgacc
caacgcctggtggagcgtctgcagcaggagcgcgaccccaaccggcgtgacctgatctac
ggcttcccgcagcagttcgccgcgctgcgcgacaacctcgccagctttctcgacggcgtg
ttcaaacccaacccctacgaggagcgggtgctgctgcgcggcgtctatttcaccagtggc
actcaggaaggcagccccatcgaccgcctgatcggtgccatggcgcagagcatgaacctc
gaccgccagcacctggcgcggcagaccggcaccgggcgcagctacttcatcgagcggctg
ttccgcgaggtggccttcggcgagcgcggcctggtgggcgccaaccccaaggtggagcgc
cggcgcaagtggatcacccgcggcgccctggccgcctccgtgctgctgttcgtcgcggtc
gccagcgtctggctggtcagctacaacgccaaccaggcctatatcgccgaggtcgacgcg
cgagtggccccgctcaagggccagctggaggccctgagcccggcgcagcgcgaagtgctg
gcggtgctgccgctgctcaacgccattcgccacgtggcggacaacccgccgtcctgggcc
gccggcttcggcctgtaccagggcgacatgctcggcgccgaagccggcagcgtctatcgc
aagctgctgatcgcggtgatggcgccgcggctgctgacccgcatcgaggaacagctgcgc
agcggcggcaattccgacttcctctatgaagggctcaaggcctatctgatgctggccagc
gccgaccagtacgatgcggacttcatcaaggcctggatcaacctggactgggaccagagc
ctgccgcgcgatctggcgccggatcagcgcctggccctcggcgagcacctcgatgcgctg
ttcgcgcgcaagccgccaccggcgcggctggacgagaacctgatcgaggacctgcgccgg
cagctgcagcagatgtcggtggcgcagcgcgtgtacaaccgggtcaagcggcagaagctg
cccgacggtctgccggactttcgcatcagcgaagcggccgggcgcgacgccgcgctggtg
ttcacccgcaagagcggcaagccgctgaacgatccactgagcggcttctacacctaccgc
ggctatcgccaggtgttcatggtcgccagcctcagccagtccggcgcgctggccgaggag
cagtgggtgctgggccgaccgctggcggacaaccaggacgccgccagcctggccctggag
gtacgcaacctgtacttccaggattttctcggccagtgggaaagcctgctcggcgatatc
gatttcgtcgccatcaccagcgtggcccaggcggccgacgtgatgcgcgtgctgtccggg
cccaattcgccgctcaagcagctgctcgaggcggtggcgcgggaaaccgacctgcagcag
gaagaccgcctgctcgccgacaagctcaaggccgccgacggcacggtggacaagctcaag
cagcaactcggctcgctggtcggccagggggcgcagaaccagccgcaggccgcgccacag
gtggacccgatcaccgcccgcttcaacgagctgaacagcctggtgcgcaagcccgagggt
agcaacagtgcgcccatcgacgacctgctggcgcagttcaacgaactctacgtgcagctc
agcgccatgagcggcgccagtggcgacgccttgctcggcgaggcgaagaatcaggcggtg
gcctcggcgcagcgggtcaagctggccggcgaacgccagccgccgctggtgcagaacctg
gtcaactcggtggtcagcgccaccaccaacagcatgatgggcggcatccgcagccagctc
aacgccgcctgggtggccgaggtggtcaacgtctaccgccagtcgctggccggccgctac
ccgctggacagtggcagcacgcgtgacgccacgctggaggacttcggcaacttcttcggc
gtcgggggggtgatggacaactacttccgcaagtacctgcagccctacgtcgacacctcg
gcaaccacctggcgctggcagccgggggcggccgagcgcttggggataggcagcggcgtg
ctgcagaccttccagcgcgcggcggcgatccgcgatgccttcttccgctccggcggcacc
cagcccacggtgcgcttcgagctcaaaccggtggccatggacgcggcgatcagccagttc
atcctcgatctggacggccagcagatgacctacgaccacggtcccagccggccggtggcg
atgcagtggccgagccccaacagcctgggggtggtgcgcctgtcgatcaccccgccgacc
agcgccgggcgttccggcctgaccctggacggcccctgggcctggttccgtctgctcgag
caatccgacctgacccccggcgcctcgccggaccgcttcaccctgcgtctgcgcgtggac
aacgccagcgtggcctgcgaactgcgcgccagcagcgccttcaatcctttccgtggccgt
gtgctgagcggcttcagcttgccggagcggttatga

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