KEGG   Ectopseudomonas hydrolytica: NLY38_13030
Entry
NLY38_13030       CDS       T08519                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
phf  Ectopseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:phf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phf03400]
    NLY38_13030
Enzymes [BR:phf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NLY38_13030
    5.6.2.6  RNA 3'-5' helicase
     NLY38_13030
DNA repair and recombination proteins [BR:phf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NLY38_13030
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: UTH29395
LinkDB
Position
2783902..2786514
AA seq 870 aa
MDQPVRRRSLSGAWFAQRGWKPFAFQKEVWQAVKAGESGLLHASTGAGKTYALWFAALER
FATPSPAVTTSPRPRKKPVMAPLTVLWITPMRALAADTARALQAPLDDLQIPWDIGLRTG
DTSSAERARQSRKLPSTLITTPESLTLLLTRADARDAFAHLRMVVIDEWHELLGNKRGVQ
LQLALARLRLWHPPLLVWALSATLGNLEHALEVLMPAGRLVQGKLAKDLRIDSLLPAGLE
RFPWAGHLGLRMLPQVVEELEASSTALVFTNTRSQAESWYQALLEARPDWAGLLALHHGS
LSQEVRDWVEQALKEGRLKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGH
APGRPSRATLVPTHSLEVLEAAAAQSAVAERKVEARLSPDKPLDVLVQHLVSMALGGGFH
ADAMLAEVRSAWAYRSLSDDEWQWALAFIRHGGHSLTAYPDYRRAEPDSSGLWQVPDARL
ARRHRMSIGTIVSDASLAVKYWSKGGGGGSLGSVEEGFISRLRPGDTFLFAGRPLELVRV
ENMTVYVRRATSRKAAIPRWNGGRMPLSSELADAVLAKLDAAAQEEYVGPEMQLLRPLLD
VQQAWSALPGAATLLAEVLKSREGWHLFLYPFAGRSVHLGLASLLAWRLAREQPLSVSIA
VNDYGLELLCPSEVDFAARLTPALFSTDDLLSDVLASLNAGELARRRFREIARIAGLVFS
GYPGAPKSTRQLQASSALFFDVFSQYDPGNLLLGQAQEEVLRQELDVQRLQHTLQRLQSR
RLDIRTVKRATPFAFPLLVERFRESLSSEKLADRIRRMVADLEQAAGPGGYQDPAFAIDD
ERPAPRKGRSPRQGKDGLPRPSAQRPKKRR
NT seq 2613 nt   +upstreamnt  +downstreamnt
atggatcaacccgttcgtcgccgcagcctgtccggcgcctggttcgcccagcgcggctgg
aagcccttcgcctttcagaaggaagtctggcaggcggtcaaggcaggcgagtccggcctg
ctgcatgcctccaccggcgccggcaagacctacgccttgtggttcgcggccctggagcgt
ttcgccacgccctctcctgccgttaccaccagccctcgcccgcgtaaaaaaccggtcatg
gcgccgctgacggtgctgtggatcaccccgatgcgcgccctcgccgccgataccgcgcgc
gccctgcaggcgccgctggatgacctgcagattccctgggacatcggcctgcgcaccggc
gataccagtagcgccgaacgcgcgcgacagagccgcaagctgccgagtacgctgatcacc
acgccggaaagcctgaccctgctgctgacccgcgccgatgcccgcgacgccttcgcccac
ctgcgcatggtggtgatcgacgagtggcacgagctgctcggcaacaagcgcggcgtgcaa
ctgcaactggccctcgcacgcctgcgcctgtggcatccgccgctgctggtatgggcgctg
tccgccactctcggcaatcttgaacatgcccttgaggtgctgatgcccgccgggcgcctg
gtgcagggcaagctggccaaggatctgcgcatcgacagcctgctgccggccggcctagag
cgctttccctgggccgggcacctggggctgcgcatgctgccgcaggtggtcgaggagctg
gaggcgagcagcaccgcactggtgttcaccaacacccgctcgcaggcggaaagctggtac
caggccctgctcgaggcgcgcccggactgggccggcctgctcgccctgcaccacggctcg
ctgtcgcaggaggtgcgcgactgggtcgaacaggcgctcaaggaaggccgactgaaagcc
gtggtctgcacctcgagcctggacctcggggtggatttcctgccggtggaacgggtgctg
cagatcggctcacccaagggtgtggcccgcctcatgcagcgcgccggccgctccggccat
gccccggggcgcccgtcccgcgccacgctggtgcccacccatagcctggaagtgctggaa
gcggccgccgcacaaagcgccgtggccgagcgcaaggtcgaggcacggctttcgccggac
aaaccgctcgacgtgctggtccagcacctggtgagcatggccctgggcggcggtttccac
gccgatgccatgctggccgaggtgcgcagcgcctgggcctaccgcagcctcagcgatgac
gagtggcagtgggcattggccttcatccgccacggcggccattcgctgaccgcctacccc
gattaccgccgcgccgagccggactccagcggcctttggcaggtgcccgatgcacgcctg
gcgcggcgtcatcgcatgagcatcggcaccatcgtcagcgacgccagcctggcggtgaaa
tactggagcaagggcggcggcggaggttctctgggcagcgtcgaggagggtttcatctcc
cgtctgcgccccggcgataccttcctcttcgccggtcgcccgctggaactggtgcgggtg
gaaaacatgaccgtctacgtgcgccgcgccaccagccgcaaggccgcgatcccgcgctgg
aacggcggacgcatgccgctctccagcgaactggcggacgccgtgctggccaagctcgac
gccgctgcccaggaagaatacgtcggcccggagatgcagctgctgcgcccattgctcgac
gtgcagcaggcctggtccgccctgcccggcgccgccaccctgctggcggaggtgctcaag
tcccgcgaaggctggcatctgttcctctatcccttcgccggtcgttcggtgcatctggga
ctggccagcctgctggcctggcgcctggcccgcgaacagccgctgagcgtttccattgcg
gtcaatgactatggcctggagctgctgtgccccagcgaggtggatttcgccgcgcggctc
acgcccgcgctgttcagcacggacgacttgctctccgacgtactcgccagcctcaacgcc
ggggagcttgcgcgccggcgctttcgcgagatcgcccgcatcgccggcctggtgttcagc
ggctaccccggcgcgccgaagagcacccgccaactacaggcctccagtgcactgttcttc
gacgtgttcagccaatacgacccgggcaacctgctgctcggccaggcccaggaagaagtg
ctgcgccaggagctggacgtgcagcgcctgcaacacaccttgcagcgcctgcaatcgcgc
cggctggatatccgtacggtcaaacgcgccacgccgttcgccttccccctactggtggag
cgctttcgcgaaagcctgagttcggagaaactcgctgaccgtatccggcgcatggtggcc
gatctggaacaggccgccggcccgggtggttatcaggacccggcattcgccatcgacgac
gagcgcccggcgccgcgcaagggccgctccccgcgtcagggcaaggacggcctgccgcgg
ccatcggcgcagcgcccgaaaaagcgccgctga

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