Ectopseudomonas hydrolytica: NLY38_13795
Help
Entry
NLY38_13795 CDS
T08519
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
phf
Ectopseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phf03000
]
NLY38_13795
Transcription factors [BR:
phf03000
]
Prokaryotic type
Helix-turn-helix
Other families
NLY38_13795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
GAF
AAA_2
Mg_chelatase
AAA
HTH_29
HTH_30
AAA_16
HTH_7
HTH_28
HTH_23
ATPase
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UTH29538
LinkDB
All DBs
Position
complement(2959527..2961482)
Genome browser
AA seq
651 aa
AA seq
DB search
MHRSSDPSATPTSGKHLVDSQVVARSWQRSQHYGLCQRDKLLFEAPLVATGKQIAERDRL
LLDCAMPEMQQLHAALAPQDWVLACIDLEGVVLSSLSGRGAGTRELSQVFRIGAQLSEQN
VGTTAPGCALAERESVFFVGEEHYLEEARQFSCLATPIFGLDGGIVGVLDASSRQGAPSV
YTLESLVFAARAIENRLFAQLGEVLLVHLHHRLDILGTPLEGLLAFDPAGKLRCANRIAG
QLLRMGEVRAGLDFAELFDMPFAHAACFRRHDLSAPLRLRSHHGGELHACITQGPPQRTA
PMLAEAPRPRRSAEPLPTPHSGACLQDPALQDALARARKAFARDIPVLINGETGTGKEVF
ARLLHESSARAGEAFVAINCSSIPASLIESELFGHVEGAFTGSRKGGAIGKIEQAHKGTL
FLDEIGDMPLELQGRLLRVLQERSLSRLGSNQLIKVDCALICATHRDLQQLSAEQGFRED
LYYRINGLRVSLPALRERRDLGALIQHLLRAETTGQQSLQLSPAALQALLDYHWPGNIRQ
LYQCLRLAAALAEDDGEIGVQHLPDEVRAGCGEQAATVAGEGLTLEAGSTLQLAEARAIR
AAVEAAGGNLSAAARSLGIARATLYRKLKGMNRGSRPLACVVSGTPPARPE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcacagatccagcgacccctccgcaacgcccacttcaggcaagcatctggtcgattcc
caggtagtcgcccgttcctggcagcgctcgcagcactacggcctgtgccagcgcgacaag
ctgctgttcgaggcgccgctggtggccactggcaagcagatcgccgagcgcgaccgcctg
ctgctggactgcgcaatgcccgagatgcagcagctgcatgcggcgctggcaccgcaggat
tgggtgctggcctgcatcgatctggaaggcgtggtgctcagtagcctcagtgggcgcggc
gccggcacccgcgagctgagccaggtatttcgcatcggcgcgcagctttccgagcagaac
gtcggcaccacggcgccgggctgcgccctggccgagcgcgagtcggtgttcttcgtcggc
gaggagcactatctggaggaggcccgccagttctcctgcctggccacgccgatcttcggc
ctcgacggcggcatagtcggggtgctggacgccagcagccggcagggcgcgccctcggtc
tacaccctggagtcgctggtgttcgccgctcgcgccatcgagaaccgcctgttcgcccag
cttggcgaggtgctgctggttcacctgcatcatcgcctggacatcctcggcacgccgctg
gaggggctgttggccttcgacccggcgggcaagctgcgctgcgccaaccgcatcgccggc
cagttgctgcgtatgggcgaggtgcgcgcgggcctggacttcgccgagctgttcgacatg
cccttcgcccacgccgcctgttttcgccgccatgacctcagtgcgccgctgcgcctgcgc
agccaccacggcggcgaactgcacgcctgcatcactcagggcccgccgcagcgaacggcg
ccgatgctggccgaggcaccgcgcccgcggcgcagcgccgagccactgccgacgccgcac
agcggtgcctgcctgcaggacccggcgctgcaggatgccctggcgcgggcgcgcaaggcc
ttcgcccgcgacatcccggtgctgatcaatggcgagacgggcaccggcaaggaggtcttc
gcccgcttgctgcacgagagcagtgcgcgggctggcgaagccttcgtggccatcaactgc
tcgtcgattccggccagcctgatcgagtcggagctgttcggccatgtcgaaggcgccttc
accggcagccgcaagggcggcgccatcggcaagatcgagcaggcgcacaagggcacgctg
tttctcgacgagatcggcgacatgccgctggagctgcagggccgtctcttgcgcgtgctg
caggagcgcagcctgagccgcctgggcagcaaccagctgatcaaggtggactgcgcgctg
atctgcgccacccaccgcgacctgcagcagctcagcgccgagcagggctttcgcgaggat
ctctactaccgcatcaacggcctgcgcgtgagcctgccggcactgcgcgagcgtcgcgac
ctgggggcgctgatccagcacctgctgcgcgccgagaccaccggacagcagtctctccag
ctgagcccggcggcgctgcaggcgctgctggactatcactggccgggcaatatccgccag
ctctaccagtgcctgcgcctggctgcggcgctggccgaggacgacggcgagatcggtgtg
cagcacctgccggacgaggtgcgcgcaggctgcggcgaacaggccgcgacggtggcgggc
gaagggctgacgctggaggcggggagcacgctgcagcttgccgaggcgcgggccattcgc
gccgcggtggaggccgccggcggcaacctttcggccgccgcgcgcagcctgggtatcgcc
cgcgcgacgctgtatcgcaagctcaagggtatgaacaggggtagcaggccgctcgcctgc
gtggtgtctggcacgccaccggcgcgcccggaataa
DBGET
integrated database retrieval system
