Ectopseudomonas hydrolytica: NLY38_13965
Help
Entry
NLY38_13965 CDS
T08519
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
phf
Ectopseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phf03000
]
NLY38_13965
Transcription factors [BR:
phf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NLY38_13965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
CON_HrpB
Motif
Other DBs
NCBI-ProteinID:
UTH29570
LinkDB
All DBs
Position
3001060..3001938
Genome browser
AA seq
292 aa
AA seq
DB search
MRRLNFHHLHYFWAVAKEGNLTRAAQSLHVAQSALSTQIRALEEQLGHPLFIRSGRNLLL
TEAGRLVLDYAESIFALGSELQMTLQGALQANRQLRIGAVATLSRNFQENLLRPFLGRAE
LRITLESGSLGELLERLALHKLDVVLTNQAVSSDAQRPWRCRLLDRQTVCLVGPPRTTGQ
SFELRRDLPQARLIVPGRSSDIRSQFELFCDSHDLQPNICAEVDDMAMLRLLARDSGDLA
LLPAVVVQDELQAGLLQLYAEIPEVAEQFFAVTLQRHFNLNILDELLAQRPG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcctgaacttccatcacctgcactacttctgggccgtggccaaggaaggcaac
ctgacccgcgccgcgcagtcactgcatgtggcccagtcggcgctgtcgacgcagattcgc
gccctcgaagagcagcttggccatccactgttcattcgttccgggcgcaacctgctgctg
accgaggccgggcgcctggtgctggattacgccgagagcatcttcgccctcggcagcgag
ctgcagatgaccctgcagggcgcgctgcaagccaaccggcagctgcgtatcggcgcggtg
gcgaccctgtcgcgcaatttccaggaaaacctgctgcgaccctttctcggccgcgccgaa
ctgcgcatcaccctggagtccggcagcctgggcgagttgctggaacgcctggccctgcac
aagctggatgtggtgctgaccaaccaggcggtgagcagcgatgcccagcggccctggcgc
tgccgtctgctggaccgccagacggtgtgcctggtcggcccgccgcgcaccacggggcaa
agcttcgagctgcgccgcgacctgccgcaggcgcgcctgatcgtgccggggcgcagcagc
gacatccgcagccagttcgagttgttctgcgacagtcacgacctgcagccgaacatctgt
gccgaggtcgacgacatggccatgctgcgtctgctcgcgcgcgactcgggcgaccttgcc
ctgctgcccgcggtggtggtgcaggatgagctgcaggccgggctgctgcagctgtacgcg
gagattcccgaggtggccgagcagttcttcgccgtcaccctgcagcgtcacttcaatctc
aacatcctcgacgagctgctcgcccagcggcccggctga
DBGET
integrated database retrieval system
