Ectopseudomonas hydrolytica: NLY38_14145
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Entry
NLY38_14145 CDS
T08519
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NLY38_14145 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phf03400
]
NLY38_14145 (recC)
Enzymes [BR:
phf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NLY38_14145 (recC)
DNA repair and recombination proteins [BR:
phf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NLY38_14145 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UTH29601
LinkDB
All DBs
Position
complement(3040356..3043769)
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AA seq
1137 aa
AA seq
DB search
MSASPELSPGLIVIHGNHLEELRALAVQWMRRYPLRPLENEVLLVQSNGIAQWLKLALAE
RDGCGIAAALDVDLPARFLWQAYRNVLGKDAIPQESPLDKAPLTWRLMRLLPGLLAEEAF
APLRRFLADDQDLRKRHQLAERLADLFDQYQVYRADWLADWAAGQDRLRTSRGGERPLEG
DSRWQPALWRALLADVGEQHLAESRAGVHPRFVARLAELDAPPAGLPRRITVFGISSLPA
QVLEALAAMARFSQVMLYVHNPCQHHWGDIVEDKDLLRHEYRRQQRKGRPGAQIGLFEQE
DMHQHGQPLLAAWGKQGRDYINLLDQYDEPQRYREQFDRIDLFSPASEDSLLGQLQNDIL
DLRPLAETRSTWPPVDPAKDYSLRFHIAHSAQREVEVLHDQLLASFSEDATLRPRDIIVM
VPDVNAYAPHIQAVFGQFASDDPRFIPFTLADQGLRGKEPMVIALEHLLRLPDSRFSVSE
ILDLLDVAALRQRFAIAEEQLPTLRRWLEGAGVRWGLDASQRQALGLGENLEQNTWRFGL
RRMLLGYAVGTGDAFAGIEPYDEIGGLDAALIGPVTRLLETLDRHLQQLREPTTPVQWGE
RLRGLLDDFFQPQSDREEVPTTQLLDALDAWLALCEAATLGEALTLPVVREAWLDGLDQG
RLSQRFLAGAVNFCTLMPMRAIPFRQVCLLGMNDGDYPRSQAPLDFDLMAGDYRPGDRSR
REDDRYLLLEALLAARDRLYISWVGRSIRDNSERPPSVLVGQLRDHLASAWTLVGGGDLL
HGLTTEHPLQPFSRRYFDGEGQLFSYAHEWAALHGQVSACESAASLPAWEEGQQLTPELL
QSFLRDPVKCFFTRRLKVYLDEEEQAQLDSEPFALDGLQRYQLQEALLKAAVAGEGDSDD
ALRSAADRLQRSGVLPLAGFGEQYRNALLEPLPAQVQRYQGLCLCWPTLLESPQRLAFAA
NGVQLDGWLAGLRQMADGSLARLELLPGALHKDKSWKWHRLLRPYVLHVIAAACGVPLTT
LLVGEDRSLAFEPVATEHAARVLTVWLEAWSAGMQAPLPVALKTSLARLQDNNEDKARSV
YEGTYNLAGEVQGSASLARQFPDYATLTADGQFPAWSERLYQPLLDSNPRALEEDAA
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccagcccggagctgtcccccggccttatcgtcattcacggtaaccacctcgaa
gagctgcgtgcgttggcggtgcagtggatgcggcgctatccgctgcggccgctggaaaac
gaagtgctgctggtgcagagcaacggcatcgcccagtggctcaagctggcgctggccgag
cgtgacggctgcggcatcgcggcggcgctggatgtcgatctgccggcgcgctttctctgg
caggcgtaccgcaacgtgctgggcaaggacgcgattccgcaagagtcgcccctggacaag
gcgccgctgacctggcgcctgatgcggctattgccgggcctgctggccgaggaggccttc
gctccgctgcgccgcttcctcgccgatgatcaggacctgcgcaagcgccaccaactggcc
gagcgtctggccgatctgttcgaccagtatcaggtctaccgcgccgactggctggccgac
tgggctgccgggcaggatcgcctgcgcacctcgcgcggcggcgagcggccactggagggc
gactcacgctggcagcccgcgctatggcgcgccctgctggcggacgttggcgagcagcac
ctggccgagagccgcgccggcgtgcatccacgcttcgtcgcccgtctggccgagctggac
gcgccgccagccggactgccgcggcgcatcaccgttttcggcatctcttcgttgccggcc
caggtgctggaggcgctggcggccatggcgcgcttcagccaggtcatgttgtacgtacac
aacccttgtcagcaccactggggcgatatcgtcgaggacaaggacctgctgcgccacgag
taccgtcgccagcagcgcaagggcaggccgggcgcgcagatcggcctgttcgaacaggag
gacatgcaccagcacgggcagccgctgctggcagcctggggcaaacaggggcgcgactac
atcaacctgctggatcagtacgacgagccgcagcgttaccgcgagcagttcgaccgtatc
gacctgttcagcccggccagtgaggacagcctgctcggccaactgcagaacgacatcctc
gacctgcgtccgctggcggaaacacgcagcacctggcctcccgtcgatcccgccaaagat
tattcgctgcgctttcatatcgcccacagcgctcagcgcgaggtggaggtgctgcacgac
cagctgctcgccagtttcagcgaggacgccacgctaaggccgcgcgacatcattgtcatg
gtgcccgacgtcaatgcctacgcaccgcatatccaggctgtgttcggccagttcgccagc
gacgatccgcgcttcattcccttcaccctggccgaccaggggctgcgcggcaaggagccg
atggtcatcgcgctggaacacctgttgcgcctgccggacagccgcttcagcgtcagcgag
attctcgatctgctggatgtcgccgcgctgcgtcagcgcttcgccatcgccgaggagcag
ttgcccaccctgcgccgctggctggaaggcgccggtgtgcgctgggggctggacgcgagc
cagcggcaggcgctgggcctgggcgagaatctggagcagaacacctggcgcttcggcctg
cggcgcatgttgctgggctacgcggtgggtacgggcgacgccttcgccggtatcgagccg
tacgacgaaatcggcgggctcgatgccgcgctgatcggcccggtgacgcggctgttggag
actctcgaccggcacctgcagcaattgcgcgagccgaccacaccggtgcagtggggcgaa
cgcctgcgcggtttgctcgacgacttctttcagccgcagagcgaccgtgaagaagtaccg
acgacccagctgctcgatgcgctggatgcctggctggcgctctgcgaggccgcgacgctg
ggcgaagcgctgaccctaccggtggtgcgcgaggcctggctggacgggctcgaccagggg
cggctgagccagcgttttctcgctggtgcggtgaacttctgcaccctgatgccgatgcgc
gcgattccgttccgtcaggtctgcctgctgggcatgaacgatggtgactatccgcgcagc
caggcgccgctggatttcgacctgatggccggtgattaccgccccggtgaccgctcgcgc
cgcgaggatgaccgctatctgctgctggaagcgctgctggcggcgcgcgatcgtctgtat
atcagctgggtggggcgcagcattcgcgacaacagcgagcgcccgccgtccgtgctggta
ggtcaattgcgtgaccatcttgccagcgcctggacgctggtcggtggcggcgacctgctg
catggcctgaccaccgagcaccccttgcaacccttcagccgccgctacttcgatggcgag
gggcagctgttcagttatgcccacgagtgggcagccctgcatggccaggtctcggcctgc
gaaagtgctgcgtccttgccggcctgggaggagggacaacagcttacgcccgagctgttg
cagtcgttcctgcgcgatccggtgaagtgcttcttcactcgccgcctcaaggtgtatctc
gacgaagaagagcaggcgcagcttgacagcgaacccttcgccctcgacggcctgcagcgc
taccagttgcaggaagcgctgctcaaggcggcagtcgcaggcgagggggacagcgacgat
gcgctgaggtcggcagccgatcgcctgcaacgcagcggcgtgctgccgctggccggcttt
ggcgagcagtaccgcaacgccctgctggagccgctgccggcgcaggtgcagcgctaccag
gggctttgcctgtgctggccgaccctgctggagtcaccgcagcgcctggctttcgcggca
aacggtgtgcagctcgacggctggcttgccgggttgcggcagatggccgacggcagcctg
gcgcgtctggaactgctgccgggtgcgttgcacaaggacaagagctggaagtggcatcgc
ctgctgcgcccctatgtgctgcacgtcattgctgcggcctgcggcgtaccgctgaccacg
ctgctggtgggggaagatcgcagtctggccttcgaacctgtagcgaccgagcatgctgcg
cgcgttttgacggtctggctggaagcctggagtgccggtatgcaggcgccgttgccggtc
gccctgaaaacctcgctggcccggttgcaggacaacaatgaggacaaggctcgcagcgtc
tacgagggcacctacaacctcgccggtgaagtccagggtagcgccagcctggcgaggcag
ttcccggactacgccacactcaccgccgatggccagtttccggcatggagcgagcggctc
taccagccactgcttgatagcaacccccgggcgcttgaggaggacgcagcatga
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