Ectopseudomonas hydrolytica: NLY38_16055
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Entry
NLY38_16055 CDS
T08519
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
phf
Ectopseudomonas hydrolytica
Pathway
phf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NLY38_16055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phf02000
]
NLY38_16055
02044 Secretion system [BR:
phf02044
]
NLY38_16055
Transporters [BR:
phf02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NLY38_16055
Secretion system [BR:
phf02044
]
Type I secretion system
Multiple protein transporter
NLY38_16055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_16
SMC_N
STAS_2
AAA_29
AAA_33
TrbE
Motif
Other DBs
NCBI-ProteinID:
UTH29948
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All DBs
Position
3456643..3458382
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AA seq
579 aa
AA seq
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MDVPQSPRSELAEALFRLRRTFYALAAFSGVINLLMLTPAVYMLQVYDRALVSSNVTTLL
MLTILVIGLYVLMALLEVVRSSVLIRVGNRLDMMLNKRIFGAAFERNLRRAGGNPAQALQ
DLSQVRQFLTGNGLFAFFDAPWTPIFLLVIYLVHPLLGLVTLLGSLLLLALAWLTEVSTR
KPLAEANQASLISGSFANNNLRNAEVIEAMGMLPAIRQRWFGNHLKILELQTLASDRAAY
IAGGSRFVRVTLQSLILGTGALLAIQGKITPGMMIACSILSGRALAPVEQVISTWKQLLS
SRAAWARLSDLLADFPAHKPTMPLPKPLGMLHVENAFASAPGSPTPILRGISFNLSPGEA
LGIIGPSASGKSTLARLLVGVWPAQGGKVRLDGADVYQWNKAELGPWLGYLPQDVELFEG
SVAENIARFGEIDGDAVILAAKQAGVHEMILHLPQGYDTPLGADGGSLSGGQRQRIGLAR
ALYGEPSLIVLDEPNASLDDVGEAALLQALLDLKQRGKTLVLISHRPTVLNMVDKVLVLR
EGAVQMFGSRDEVFAALRQANVISSGKGTSNLASIRAKE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcccgcagtccccgcgttccgagctggccgaggcgttgtttcgtctgcgccga
accttctatgccctggccgccttcagtggggtgatcaacctgctgatgctgacacctgcc
gtttatatgctgcaggtctacgaccgcgccctggtcagcagcaatgtcaccaccctgctg
atgctcaccatactggtgattggcctctacgtactgatggcactgctggaggtggtgcgc
tccagcgtgctgattcgcgttggcaaccgcctcgacatgatgctcaacaagcgcatcttc
ggtgccgccttcgagcgcaacctgcgtcgcgccggcggcaatccggcccaggcgctgcaa
gatctctcacaggtacgccagtttctaaccggcaacggtctgttcgccttcttcgacgcg
ccctggacccccatcttcctgttggtgatctacctggtgcacccactgctcggcctggtt
accctgctcggctctctactactgctggccctggcctggctcaccgaggtcagcacgcgc
aagccgctggccgaggccaaccaagcctcgctgatatccggcagcttcgccaacaacaac
ttgcgcaatgccgaagtgatcgaggcgatgggcatgctgccggcgattcgccagcgctgg
ttcggcaaccacctgaaaatcctcgaattgcaaaccctggcctccgaccgcgcggcctac
atcgccgggggcagtcgtttcgtgcgtgtcaccctgcagtcgctgatactcggtacggga
gccttgctggcgatccagggcaagatcaccccaggcatgatgatcgcctgctcgattctc
tccggccgcgccctggcgcccgtggaacaggtgatctcgacttggaagcagttgctctcc
agccgtgcagcctgggccaggctgtccgatctgctggccgactttcctgcgcacaagccg
accatgccgctgcccaagccgctgggcatgctccatgtggagaatgccttcgccagtgca
cccgggtcgcccacgccgatcctgcgcggtatcagtttcaacctgtcgcccggcgaagcg
ctgggcatcatcggcccctcggcctccggcaaatccaccctggcacgcctgctggtcggc
gtatggcccgcgcaaggcggcaaggtgcgcctggacggcgcagacgtctatcaatggaac
aaggccgagctgggcccttggctcggttacctgccccaggacgtcgaactcttcgaaggc
agcgtcgccgaaaacatcgcccgcttcggcgagatcgacggcgacgcagtgatcctcgcg
gccaaacaggccggcgtgcacgagatgatcctgcacctgccgcaaggctatgacacgccc
ctgggcgccgacggcggctcgctgtccggtggccagcggcaacgcatcggcctggcccgt
gcgctgtatggcgaaccgtcgctgatcgtcctcgacgaacccaacgccagcctcgacgac
gtcggcgaagctgcgctgttgcaggcgctgcttgatctcaagcagcgcggcaagaccctg
gtgctgatctcccaccgccccaccgtactgaacatggtggacaaggtactggtgctgcgc
gaaggcgctgtgcagatgttcggcagccgcgatgaagtattcgccgcgttgcgccaggcc
aacgtgatctcctccggcaaggggacatcgaacctggcctctatacgggccaaggagtga
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